Gene detail

Detail information of MD16G1094900 Annotation

Gene ID	Annotation
MD16G1094900	Protein of unknown function

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0048

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD16G1094900	mRNA	Chr16	6563626	6566762	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT1G60460.3	1	unknown protein
Arabidopsis thaliana	AT1G60460.1	0.964	unknown protein
Arabidopsis thaliana	AT1G60460.2	0.929	unknown protein
Prunus persica	Prupe.1G251700.1.p	1	-
Prunus persica	Prupe.1G251700.2.p	0.89	-
Pyrus communis	PCP000397.1	1	-
Rubus occidentalis	Ro04_G00308	1	-
Vitis vinifera	GSVIVT01013762001	1	-
Solanum lycopersicum	Solyc06g065620.1.1	1	-
Populus trichocarpa	Potri.010G041900.1	1	-
Nicotiana benthamiana	Niben101Scf07974g00011.1	1	"unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 23 Blast hits to 23 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). LENGTH=493"
Oryza sativa	LOC_Os06g49450.1	1	expressed protein
Zea mays	GRMZM2G439198_P01	1	-

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.229853
SRR5252888	dormant buds	no	dormant buds(0 month)	0.521278
SRR5252889	dormant buds	no	dormant buds(0 month)	0.134194
SRR5252886	dormant buds	no	dormant buds(1 months)	0.735756
SRR5252887	dormant buds	no	dormant buds(1 months)	0.781964
SRR5252884	dormant buds	no	dormant buds(2 months)	0.374639
SRR5252882	dormant buds	no	dormant buds(3 months)	0.50099
SRR5252883	dormant buds	no	dormant buds(3 months)	0.204718
SRR5252880	dormant buds	no	dormant buds(4 months)	0.749987
SRR5252881	dormant buds	no	dormant buds(4 months)	0.346856
SRR5252878	bud break	no	bud break	1.24502
SRR5252879	bud break	no	bud break	0.345147
SRR3744766	flower	no	mature	0.105071
SRR3744767	flower	no	mature	0.137992
SRR3744768	flower	no	mature	0.16203
SRR6308190	stigmas	no	open flowers	0
SRR6308181	styles	no	open flowers	0
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.26437
SRR6308192	pollen	no	open flowers	3.01055
SRR6308191	petals	no	open flowers	0.109528
SRR6308194	sepals	no	open flowers	0
SRR6308193	receptacles	no	open flowers	0.0846563
SRR6308189	ovaries	no	open flowers	0.0687882
SRR3384922	fruit	no	1 week after full bloom	0.234515
SRR3384921	fruit	no	2 week after full bloom	0.126924
SRR3384920	fruit	no	3 week after full bloom	0.0558794
SRR3384919	fruit	no	4 week after full bloom	0
SRR3384923	fruit	no	5 week after full bloom	0
SRR3384918	fruit	no	6 week after full bloom	0
SRR3384917	fruit	no	8 week after full bloom	0
SRR3384916	fruit	no	10 week after full bloom	0
SRR3384915	fruit	no	12 week after full bloom	0
SRR3384914	fruit	no	14 week after full bloom	0
SRR3384913	fruit	no	16 week after full bloom	0
SRR3384912	fruit	no	18 week after full bloom	0
SRR3384911	fruit	no	19 week after full bloom	0
SRR3384910	fruit	no	20 week after full bloom	0.0488177
SRR768128	whole fruit	no	25 days post anthesis	0.493724
SRR768129	whole fruit	no	35 days post anthesis	0.0774546
SRR768130	whole fruit	no	60 days post anthesis	0.25972
SRR768131	whole fruit	no	87 days post anthesis	0
SRR7343308	immature fruit flesh	no	immature	0.346431
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.0325417
SRR7403506	fruit	uninfected	mature	0.0343755
SRR7403507	fruit	uninfected	mature	0.0408151
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	0.17482
SRR1613974	Central seeds	no	20DAPF	0.21619
SRR1613975	Central seeds	no	20DAPF	0.13045
SRR1613976	Lateral seeds	no	20DAPF	0.025728
SRR1613977	Lateral seeds	no	20DAPF	0.169173
SRR1613978	Lateral seeds	no	20DAPF	0.0609388
SRR3744786	stem	no	mature	0.108106
SRR3744787	stem	no	mature	0.0534837
SRR3744772	stem	no	mature	0.0533433
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.728691
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	1.14115
SRR1089478	leaf	Virus-free	plantlets	0.788212
SRR1089477	leaf	ASGV-infected	plantlets	0.349376
SRR767660	leaf	uninfected	fully developed	0
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	5.38672
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.145618
SRR6308182	young leaf	no	immature leaves	0.497651
SRR3744769	leaf	no	mature	0
SRR3744770	leaf	no	mature	0
SRR3744771	leaf	no	mature	0.0286556
SRR5405145	leaf	no	mature	0
SRR6320561	leaf	no	mature	0