Gene detail

Detail information of MD16G1120800 Annotation

Gene ID	Annotation
MD16G1120800	DNAJ heat shock N-terminal domain-containing protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0584	UV excision repair protein RAD23 proteasome binding ubiquitin binding

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD16G1120800	mRNA	Chr16	8661491	8665035	-

Sequences

CDS:

MD16G1120800

TTTTTGGTATTTGGGATACGTAGGTTGTGAGAAGTTTTGTTTTTGAGAAAAGGGGCCAGTTTTGGGGATTTTTTAGATTTGGGCTAATAAGAAGGAGGGGCAGAAAAAAGAAAAGAAAAAAAATTGGTGGAGGTCCGTCCATGGTGTTTCTCTGAGATTCAAATTCCTCAGCCAGTGACCAGCGCAGCTCACATAATAAGGTTGCTGAATTGCTAGAGTAATTTGGGAGCATGGGCAAGTAGCAGTTGTAGTCTTGGCTTTCTTGTAGCTTTGGGGATTTTTTATACTACTTTAGGATTAAAAAAAGGCTTCAAGCTCAAGTGCTGTAAAAACAGTAAGCAAACATTAGAGAGGACGAAGATAGAATAGGAATATGGAGTGCAACAGAGATGAGGCGGCTAGGGCAAAAGAGATTGCGGAAAGAAAGTTCACAGCAAAGGATCTTATGGGGGCAAAGAAGTTTGCCTTGAAGGCTCAAAATTTGTTTCCGGGGTTAGAGGGGATGCCCCAAATGTTGGCAACCCTCGATGTGCATATTGCGGCGGAGAACAAAATAAATGGGGAGGCTGATTGGTACGGGATACTTGGTGCGGATCCAAAAGCAGATGATGAGGCAGTGAGGAAACAATATAGGAAACTAGCTCTTATGCTTCACCCTGATAAGAACAAGTCTATAGGAGCTGATGGAGCGTTTAAGCTACTATCAGAAGCATGGAGTTTGTTGTCTGATAAATCTAAGAGAGTAGCCTATGACCAGAAGAGGAGAGTACATCAAAGGGTAGCAACTGCGAGTGGGAGTTCACAGGCTCCTCCAGGGGCCAATGGTTTCTACAATTTCACAAAAGGTACAACATCAGGCGCACAGACTCAGAAGGTTAATACACAGACTCAGAAGAGTACCACAGAGACTCAGAAGGGTACCTCACAGAATCAGAAGGGTACCTCATGGGCCAGCCGCTCTTCAGCTCCTGCTTCATCTCAAAAACCAAGAGCTAATACCTTTTGGACAGTGTGTCATAAATGCAAGATGCAGTATGAGTATCTCAGGATTTATCTTAATCATAATCTTCTTTGCCCGAATTGCCATGAACCATTTCTAGCAGTAGAAATAGCTCCACCACCTACAAATGGTGCCAAGTCAACTCCACCAAAGCATGAAACAGCTGATAGAATGGGTGTTGGATCTGCTGGTTTCAATGGTAATCAATCGTACAACCAAAACAACTTCCAATGGGGTTCATTCTCTAAAGCATCAAGTGCTTCTACGGCTGCCCAAGCCGCAAACGTGGTTAGCCAGGCATATGAGAAAGCCAAGAGAGAGCGGGAGCAGGCTCAAGCAGCATTAAAAAGAGAGGAGTTACGGAGGAAACATCAATCCTCCAAGAAGGCAAGCGGTGCTTCATCTACAGGGTACCCTAATGCTGCCAAGAGAAGAAGAGGAATGGAAGATGTCGGTGTCAGCAGCTACGGAAGGGATGTCACAAATCAAATGGGTGTGGGAGGAGCTGGAACAACCAAATTTTCTGGACCAAACGGAAGCGCCAGGCCTAGTATCACAAGGGATATCTCCCAGATTGATATTCCAAATTTACTAAGGGAGAAGGCTAGAAAAGAAATTCGGAAGAAACTAAATGAATTCACTGTGTCCAAGACTGCAGCCAAAGAGACGGTGAATGGAAACGAGAGAGAAAAATCTTTGGGAAACATTGATGTGCATAGAAATCAAAAGCAGTCTGGTGAGCCAGTGGACACAAAGAATGGCTCTTCTGACATGAAAGGTTCTGGCATTTCTGGTGTCCCTTCAGATGCAGACATATTGTCGATAAATGTTCCTGATTCTGATTTTCATGATTTTGACAAGGATCGAACAGAGAAGTGTTTTGAAGATAATCAGGTCTGGGCTGCATATGATAATGATGATGGCATGCCAAGGTTTTATGCGTTAGTTCAAAAGGTGATTTCTGTGGATCCTTTCACAGTGCGGATCAGCTGGCTGAACTCAAAAACAAATAGTGAACTGGGTCCTCTTAACTGGGTATCCTCTGGCTTCTCAAAGACGTGTGGGGAGTTCCGAGTAGGGAAATATGAAGTGAGTAATTCACTTAATTCTTTTTCTCACAGAGTTCGGTCAACAAAAGGTCCACGAGGGGCTATCTGCATATATCCCAGGAAGGGGGATGTTTGGGCGCTATACCGGAATTGGTCCCCGGACTGGAACGAACTGACAGCTGACAATGTCATTCACAAGTATGATATGGTCGAAGTTGTTGAAGACTTTAGTGAGGAGCAAGGTGTACTTGTGACTCCCTTGGTGAAAGTGGCTGGCTTCAAGACAGTATTTCACCGGCACTTGGATCCCAGAGAGGCCAGGAGGATCCCTAGAGAAGAGCTGTTTCAGTTCTCTCATCAAATCCCTTCATGCTTGATCACGGGTCAGGAAGCTGCAAATGCTCCAAAGGGTTGTCGGGAGCTGGATCCGGCAGCTACTCCGTTGGAGCTTCTTAAAGTAATAAATGACATTAAAGAGGAAGATATGATGGAGATTGACAAAAAGTGCCAGCAAGGCGATGTAGCAGAGGATGTTGAGAATAATACTGGCATATAGATACAGCAGCGAATTCTAGTCCTGTCACGGAAGAAGCGAAAAGGGGCTGATTTGTGATATATGCAAATAGAATTTGCTGACATACAAATTTTGGGGCTATGCAGCATGAGTTGGTGAATTTTTGTGGAAAGTTTGATAGGTGAACATCTCATCCATGCGCCCTGGGAGTTGAAGCAGGAAACCCTGAAGGTCCCCTCACGCAGCTGAATCCGAGATTTTGTTCGAGGCGATAGAAGGTGAAACCCTGAAAGCCCAAAAATTTACATTTTCCAACAGCCATTTTTTGTCTCCTCTGAAAGATATATCTCTAACTATTGGTTGTCCATGAGCTGATGCTCCATTAGTCCATTTCCTTGATGAACTTGTTAAAACTCTAGTGTTGCTGTTAGTCCTCCGATTCGTTATCAATAGTAGTGGAAGCTGATACCCCATTTCATTTCA

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT2G25560.1	1	DNAJ heat shock N-terminal domain-containing protein
Prunus persica	Prupe.1G224400.1.p	1	DNAJ heat shock N-terminal domain-containing protein
Pyrus communis	PCP018053.1	1	-
Pyrus x bretschneideri	Pbr015159.1	1	-
Rosa multiflora	Rmu_ssc0000150.1_g000035.1	1	-
Rubus occidentalis	Ro04_G07120	1	-
Fragaria vesca	mrna22295.1	1	DNAJ heat shock N-terminal domain-containing protein
Vitis vinifera	GSVIVT01028708001	1	DNAJ heat shock N-terminal domain-containing protein
Populus trichocarpa	Potri.001G057200.2	1	DNAJ heat shock N-terminal domain-containing protein
Nicotiana benthamiana	Niben101Scf10502g01012.1	1	Chaperone protein DnaJ
Oryza sativa	LOC_Os03g28310.1	1	"dnaJ domain containing protein, expressed"
Oryza sativa	LOC_Os02g30620.2	1	"dnaJ domain containing protein, expressed"
Zea mays	GRMZM2G143168_P01	1	-
Zea mays	GRMZM2G159720_P01	1	-
Zea mays	GRMZM2G135655_P01	0.958	-
Zea mays	AC235541.1_FGP002_0.873		-

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.27	DnaJ	66	127	2.70E-19

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	2.41415
SRR5252888	dormant buds	no	dormant buds(0 month)	9.1446
SRR5252889	dormant buds	no	dormant buds(0 month)	7.81687
SRR5252886	dormant buds	no	dormant buds(1 months)	7.81045
SRR5252887	dormant buds	no	dormant buds(1 months)	5.874
SRR5252884	dormant buds	no	dormant buds(2 months)	10.3357
SRR5252882	dormant buds	no	dormant buds(3 months)	10.8169
SRR5252883	dormant buds	no	dormant buds(3 months)	5.64784
SRR5252880	dormant buds	no	dormant buds(4 months)	12.0323
SRR5252881	dormant buds	no	dormant buds(4 months)	9.92287
SRR5252878	bud break	no	bud break	10.5844
SRR5252879	bud break	no	bud break	8.81826
SRR3744766	flower	no	mature	7.12816
SRR3744767	flower	no	mature	6.44845
SRR3744768	flower	no	mature	6.92623
SRR6308190	stigmas	no	open flowers	2.93333
SRR6308181	styles	no	open flowers	2.33205
SRR6308188	filaments	no	open flowers	2.32898
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	2.46867
SRR6308192	pollen	no	open flowers	2.04834
SRR6308191	petals	no	open flowers	1.24624
SRR6308194	sepals	no	open flowers	1.78726
SRR6308193	receptacles	no	open flowers	1.54113
SRR6308189	ovaries	no	open flowers	2.16168
SRR3384922	fruit	no	1 week after full bloom	2.32044
SRR3384921	fruit	no	2 week after full bloom	2.54027
SRR3384920	fruit	no	3 week after full bloom	2.53834
SRR3384919	fruit	no	4 week after full bloom	2.85585
SRR3384923	fruit	no	5 week after full bloom	2.20804
SRR3384918	fruit	no	6 week after full bloom	2.97419
SRR3384917	fruit	no	8 week after full bloom	2.69703
SRR3384916	fruit	no	10 week after full bloom	2.6508
SRR3384915	fruit	no	12 week after full bloom	3.02731
SRR3384914	fruit	no	14 week after full bloom	3.20057
SRR3384913	fruit	no	16 week after full bloom	2.617
SRR3384912	fruit	no	18 week after full bloom	3.01143
SRR3384911	fruit	no	19 week after full bloom	2.86027
SRR3384910	fruit	no	20 week after full bloom	3.44709
SRR768128	whole fruit	no	25 days post anthesis	3.56237
SRR768129	whole fruit	no	35 days post anthesis	3.94694
SRR768130	whole fruit	no	60 days post anthesis	3.51367
SRR768131	whole fruit	no	87 days post anthesis	3.39412
SRR7343308	immature fruit flesh	no	immature	3.8912
SRR7343309	immature fruit flesh	no	immature	3.10445
SRR6320494	ripe fruit flesh	no	mature	4.64045
SRR5405143	ripe fruit peel	no	mature	4.07162
SRR6320572	ripe fruit peel	no	mature	3.26524
SRR7403504	fruit	uninfected	mature	2.85945
SRR7403506	fruit	uninfected	mature	3.02059
SRR7403507	fruit	uninfected	mature	3.03468
SRR7403500	fruit	infected with penicillium expansum	mature	1.78127
SRR7403501	fruit	infected with penicillium expansum	mature	1.68726
SRR7403508	fruit	infected with penicillium expansum	mature	1.62177
SRR7403502	fruit	infected with penicillium expansum	mature	2.47639
SRR7403503	fruit	infected with penicillium expansum	mature	1.85562
SRR7403505	fruit	infected with penicillium expansum	mature	2.01416
SRR1613973	Central seeds	no	20DAPF	4.17031
SRR1613974	Central seeds	no	20DAPF	4.55812
SRR1613975	Central seeds	no	20DAPF	4.25081
SRR1613976	Lateral seeds	no	20DAPF	4.94013
SRR1613977	Lateral seeds	no	20DAPF	3.77664
SRR1613978	Lateral seeds	no	20DAPF	4.38447
SRR3744786	stem	no	mature	6.74497
SRR3744787	stem	no	mature	6.69297
SRR3744772	stem	no	mature	6.67559
SRX765691	seedling shoot apex	no	4-6 week old seedling	4.30586
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	4.5473
SRR1089478	leaf	Virus-free	plantlets	3.86657
SRR1089477	leaf	ASGV-infected	plantlets	4.14371
SRR767660	leaf	uninfected	fully developed	3.25293
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	1.80017
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	4.08886
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	5.32146
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	6.19558
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	4.5418
SRR6308182	young leaf	no	immature leaves	3.20441
SRR3744769	leaf	no	mature	6.89354
SRR3744770	leaf	no	mature	7.04735
SRR3744771	leaf	no	mature	7.12017
SRR5405145	leaf	no	mature	4.24755
SRR6320561	leaf	no	mature	3.6782