Gene detail

Detail information of MD16G1132500 Annotation

Gene ID	Annotation
MD16G1132500	indole-3-acetic acid inducible 31

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD16G1132500	mRNA	Chr16	10120494	10121822	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Transcription Factors Family	AUX/IAA

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT3G17600.1	1	IAA31\|indole-3-acetic acid inducible 31
Prunus persica	Prupe.1G208300.2.p	1	indole-3-acetic acid inducible 31
Prunus persica	Prupe.1G208300.1.p	0.885	indole-3-acetic acid inducible 31
Pyrus communis	PCP010576.1	1	-
Rosa multiflora	Rmu_sc0028413.1_g000001.1	1	-
Rosa multiflora	Rmu_sc0000066.1_g000003.1	1	-
Rubus occidentalis	Ro04_G08920	1	-
Fragaria vesca	mrna22779.1	1	indole-3-acetic acid inducible 31
Vitis vinifera	GSVIVT01017711001	1	indole-3-acetic acid inducible 31
Populus trichocarpa	Potri.014G111700.1	1	indole-3-acetic acid inducible 30
Populus trichocarpa	Potri.002G186400.1	0.677	indole-3-acetic acid inducible 30
Oryza sativa	LOC_Os02g49160.1	1	"OsIAA8 - Auxin-responsive Aux/IAA gene family member, expressed"
Zea mays	GRMZM2G074742_P01	1	-

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	cellular component
GO:0046983	protein dimerization activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.926626
SRR5252888	dormant buds	no	dormant buds(0 month)	1.49103
SRR5252889	dormant buds	no	dormant buds(0 month)	0.575759
SRR5252886	dormant buds	no	dormant buds(1 months)	0.631352
SRR5252887	dormant buds	no	dormant buds(1 months)	0.335501
SRR5252884	dormant buds	no	dormant buds(2 months)	1.07159
SRR5252882	dormant buds	no	dormant buds(3 months)	0
SRR5252883	dormant buds	no	dormant buds(3 months)	0.43917
SRR5252880	dormant buds	no	dormant buds(4 months)	1.07261
SRR5252881	dormant buds	no	dormant buds(4 months)	0.595274
SRR5252878	bud break	no	bud break	1.33543
SRR5252879	bud break	no	bud break	3.25788
SRR3744766	flower	no	mature	0.810475
SRR3744767	flower	no	mature	1.27459
SRR3744768	flower	no	mature	0.885068
SRR6308190	stigmas	no	open flowers	0.416415
SRR6308181	styles	no	open flowers	0.178332
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.829117
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	2.98196
SRR6308194	sepals	no	open flowers	0.222414
SRR6308193	receptacles	no	open flowers	0.17731
SRR6308189	ovaries	no	open flowers	0.287738
SRR3384922	fruit	no	1 week after full bloom	1.50967
SRR3384921	fruit	no	2 week after full bloom	1.90648
SRR3384920	fruit	no	3 week after full bloom	1.31897
SRR3384919	fruit	no	4 week after full bloom	0.996982
SRR3384923	fruit	no	5 week after full bloom	1.05347
SRR3384918	fruit	no	6 week after full bloom	0.820909
SRR3384917	fruit	no	8 week after full bloom	0.338623
SRR3384916	fruit	no	10 week after full bloom	0.329925
SRR3384915	fruit	no	12 week after full bloom	0.390364
SRR3384914	fruit	no	14 week after full bloom	0.126199
SRR3384913	fruit	no	16 week after full bloom	0
SRR3384912	fruit	no	18 week after full bloom	0.139492
SRR3384911	fruit	no	19 week after full bloom	0.133789
SRR3384910	fruit	no	20 week after full bloom	0.104753
SRR768128	whole fruit	no	25 days post anthesis	2.55873
SRR768129	whole fruit	no	35 days post anthesis	0.82643
SRR768130	whole fruit	no	60 days post anthesis	1.38559
SRR768131	whole fruit	no	87 days post anthesis	0.834355
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	1.48934
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.139102
SRR7403506	fruit	uninfected	mature	0.0734706
SRR7403507	fruit	uninfected	mature	0.174468
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	9.88544
SRR1613974	Central seeds	no	20DAPF	10.2128
SRR1613975	Central seeds	no	20DAPF	9.35922
SRR1613976	Lateral seeds	no	20DAPF	7.38351
SRR1613977	Lateral seeds	no	20DAPF	10.4292
SRR1613978	Lateral seeds	no	20DAPF	8.29082
SRR3744786	stem	no	mature	0.536232
SRR3744787	stem	no	mature	0.708528
SRR3744772	stem	no	mature	0.0588851
SRX765691	seedling shoot apex	no	4-6 week old seedling	1.28091
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	2.09519
SRR1089478	leaf	Virus-free	plantlets	0.957367
SRR1089477	leaf	ASGV-infected	plantlets	1.11393
SRR767660	leaf	uninfected	fully developed	1.45446
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0.519414
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	1.56556
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	2.53848
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0
SRR6308182	young leaf	no	immature leaves	1.48787
SRR3744769	leaf	no	mature	0.605755
SRR3744770	leaf	no	mature	0.580351
SRR3744771	leaf	no	mature	0.701597
SRR5405145	leaf	no	mature	0.85746
SRR6320561	leaf	no	mature	0.621976