Gene detail

Detail information of MD16G1152800 Annotation

Gene ID	Annotation
MD16G1152800	enoyl-CoA hydratase/isomerase A

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD16G1152800	mRNA	Chr16	12078791	12080625	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT4G16210.1	1	ECHIA;E-COAH-2\|ENOYL-COA HYDRATASE 2;enoyl-CoA hydratase/isomerase A
Prunus persica	Prupe.1G116000.1.p	1	enoyl-CoA hydratase/isomerase A
Pyrus communis	PCP021282.1	1	-
Rosa multiflora	Rmu_sc0001900.1_g000011.1	1	-
Rubus occidentalis	Ro04_G19936	1	-
Fragaria vesca	mrna05100.1	1	enoyl-CoA hydratase/isomerase A
Vitis vinifera	GSVIVT01034981001	1	enoyl-CoA hydratase/isomerase A
Solanum lycopersicum	Solyc01g059830.2.1	1	enoyl-CoA hydratase/isomerase A
Populus trichocarpa	Potri.008G104500.1	1	enoyl-CoA hydratase/isomerase A
Nicotiana benthamiana	Niben101Scf03720g01001.1	1	enoyl-CoA hydratase/isomerase A LENGTH=265
Oryza sativa	LOC_Os03g19680.1	1	"enoyl-CoA hydratase/isomerase family protein, putative, expressed"
Zea mays	GRMZM2G033491_P01	1	Putative

Gene Ontology

GO term	Description	Category
GO:0003824	catalytic activity	molecular_function
GO:0008152	metabolic process	biological_process

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00378.16	ECH_1	18	240	3.90E-51

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	18.1581
SRR5252888	dormant buds	no	dormant buds(0 month)	6.44935
SRR5252889	dormant buds	no	dormant buds(0 month)	7.2693
SRR5252886	dormant buds	no	dormant buds(1 months)	7.23312
SRR5252887	dormant buds	no	dormant buds(1 months)	7.05984
SRR5252884	dormant buds	no	dormant buds(2 months)	6.63947
SRR5252882	dormant buds	no	dormant buds(3 months)	6.91031
SRR5252883	dormant buds	no	dormant buds(3 months)	10.1997
SRR5252880	dormant buds	no	dormant buds(4 months)	5.64263
SRR5252881	dormant buds	no	dormant buds(4 months)	9.04667
SRR5252878	bud break	no	bud break	6.74427
SRR5252879	bud break	no	bud break	5.60899
SRR3744766	flower	no	mature	26.7213
SRR3744767	flower	no	mature	25.9343
SRR3744768	flower	no	mature	28.4249
SRR6308190	stigmas	no	open flowers	15.9276
SRR6308181	styles	no	open flowers	11.2108
SRR6308188	filaments	no	open flowers	8.74561
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	26.7835
SRR6308192	pollen	no	open flowers	70.2123
SRR6308191	petals	no	open flowers	11.5359
SRR6308194	sepals	no	open flowers	14.1622
SRR6308193	receptacles	no	open flowers	9.34091
SRR6308189	ovaries	no	open flowers	10.902
SRR3384922	fruit	no	1 week after full bloom	17.7029
SRR3384921	fruit	no	2 week after full bloom	17.7617
SRR3384920	fruit	no	3 week after full bloom	17.0969
SRR3384919	fruit	no	4 week after full bloom	24.8059
SRR3384923	fruit	no	5 week after full bloom	20.5861
SRR3384918	fruit	no	6 week after full bloom	29.002
SRR3384917	fruit	no	8 week after full bloom	35.5393
SRR3384916	fruit	no	10 week after full bloom	27.4029
SRR3384915	fruit	no	12 week after full bloom	18.9792
SRR3384914	fruit	no	14 week after full bloom	28.6136
SRR3384913	fruit	no	16 week after full bloom	50.5184
SRR3384912	fruit	no	18 week after full bloom	45.6482
SRR3384911	fruit	no	19 week after full bloom	52.8511
SRR3384910	fruit	no	20 week after full bloom	51.4201
SRR768128	whole fruit	no	25 days post anthesis	6.08477
SRR768129	whole fruit	no	35 days post anthesis	17.7927
SRR768130	whole fruit	no	60 days post anthesis	21.6243
SRR768131	whole fruit	no	87 days post anthesis	23.2386
SRR7343308	immature fruit flesh	no	immature	12.5109
SRR7343309	immature fruit flesh	no	immature	14.5671
SRR6320494	ripe fruit flesh	no	mature	33.2031
SRR5405143	ripe fruit peel	no	mature	15.5302
SRR6320572	ripe fruit peel	no	mature	52.9032
SRR7403504	fruit	uninfected	mature	38.8135
SRR7403506	fruit	uninfected	mature	37.7939
SRR7403507	fruit	uninfected	mature	39.4284
SRR7403500	fruit	infected with penicillium expansum	mature	54.5872
SRR7403501	fruit	infected with penicillium expansum	mature	57.0924
SRR7403508	fruit	infected with penicillium expansum	mature	56.772
SRR7403502	fruit	infected with penicillium expansum	mature	44.87
SRR7403503	fruit	infected with penicillium expansum	mature	39.1265
SRR7403505	fruit	infected with penicillium expansum	mature	43.1568
SRR1613973	Central seeds	no	20DAPF	12.7316
SRR1613974	Central seeds	no	20DAPF	10.4818
SRR1613975	Central seeds	no	20DAPF	13.6419
SRR1613976	Lateral seeds	no	20DAPF	13.9623
SRR1613977	Lateral seeds	no	20DAPF	14.9937
SRR1613978	Lateral seeds	no	20DAPF	14.671
SRR3744786	stem	no	mature	25.1072
SRR3744787	stem	no	mature	25.7014
SRR3744772	stem	no	mature	23.8679
SRX765691	seedling shoot apex	no	4-6 week old seedling	9.45572
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	6.98148
SRR1089478	leaf	Virus-free	plantlets	10.5047
SRR1089477	leaf	ASGV-infected	plantlets	10.7769
SRR767660	leaf	uninfected	fully developed	16.4964
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	36.7424
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	17.5449
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	48.8382
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	15.0449
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	10.0413
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	23.6637
SRR6308182	young leaf	no	immature leaves	9.76975
SRR3744769	leaf	no	mature	31.7145
SRR3744770	leaf	no	mature	29.765
SRR3744771	leaf	no	mature	31.2498
SRR5405145	leaf	no	mature	10.2611
SRR6320561	leaf	no	mature	13.6077