Gene detail

Detail information of MD16G1191600 Annotation

Gene ID	Annotation
MD16G1191600	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD16G1191600	mRNA	Chr16	16928726	16932263	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Pyrus communis	PCP020161.1	1	-
Pyrus x bretschneideri	Pbr008103.2	1	-
Rubus occidentalis	Ro04_G14560	1	-
Vitis vinifera	GSVIVT01017948001	1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Solanum lycopersicum	Solyc09g075900.2.1	1	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Nicotiana benthamiana	Niben101Scf01506g03005.1	1	Polyamine aminopropyl transferase

Gene Ontology

GO term	Description	Category
GO:0003824	catalytic activity	molecular_function

KEGG

KO	Description	Enzyme
K18787	thermospermine synthase	EC:2.5.1.79

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	2.11253
SRR5252888	dormant buds	no	dormant buds(0 month)	0.202726
SRR5252889	dormant buds	no	dormant buds(0 month)	0.313129
SRR5252886	dormant buds	no	dormant buds(1 months)	0.343363
SRR5252887	dormant buds	no	dormant buds(1 months)	0.091232
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0.43838
SRR5252883	dormant buds	no	dormant buds(3 months)	0
SRR5252880	dormant buds	no	dormant buds(4 months)	1.02085
SRR5252881	dormant buds	no	dormant buds(4 months)	0.728421
SRR5252878	bud break	no	bud break	1.16205
SRR5252879	bud break	no	bud break	2.09396
SRR3744766	flower	no	mature	0.307658
SRR3744767	flower	no	mature	0.107837
SRR3744768	flower	no	mature	0.163132
SRR6308190	stigmas	no	open flowers	0.115407
SRR6308181	styles	no	open flowers	0
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.153638
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0.127335
SRR6308194	sepals	no	open flowers	0
SRR6308193	receptacles	no	open flowers	0.787372
SRR6308189	ovaries	no	open flowers	0.479738
SRR3384922	fruit	no	1 week after full bloom	0.82086
SRR3384921	fruit	no	2 week after full bloom	1.18471
SRR3384920	fruit	no	3 week after full bloom	0.325986
SRR3384919	fruit	no	4 week after full bloom	0.783023
SRR3384923	fruit	no	5 week after full bloom	0.458245
SRR3384918	fruit	no	6 week after full bloom	0.510121
SRR3384917	fruit	no	8 week after full bloom	0.184121
SRR3384916	fruit	no	10 week after full bloom	0
SRR3384915	fruit	no	12 week after full bloom	0
SRR3384914	fruit	no	14 week after full bloom	0
SRR3384913	fruit	no	16 week after full bloom	0
SRR3384912	fruit	no	18 week after full bloom	0
SRR3384911	fruit	no	19 week after full bloom	0
SRR3384910	fruit	no	20 week after full bloom	0
SRR768128	whole fruit	no	25 days post anthesis	1.64453
SRR768129	whole fruit	no	35 days post anthesis	1.71564
SRR768130	whole fruit	no	60 days post anthesis	0.151392
SRR768131	whole fruit	no	87 days post anthesis	0
SRR7343308	immature fruit flesh	no	immature	0.404325
SRR7343309	immature fruit flesh	no	immature	0.403614
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	2.54615
SRR1613974	Central seeds	no	20DAPF	2.8688
SRR1613975	Central seeds	no	20DAPF	1.95692
SRR1613976	Lateral seeds	no	20DAPF	2.51807
SRR1613977	Lateral seeds	no	20DAPF	2.62044
SRR1613978	Lateral seeds	no	20DAPF	2.68036
SRR3744786	stem	no	mature	0.0949676
SRR3744787	stem	no	mature	0.0313293
SRR3744772	stem	no	mature	0.124987
SRX765691	seedling shoot apex	no	4-6 week old seedling	1.37113
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	1.78807
SRR1089478	leaf	Virus-free	plantlets	0
SRR1089477	leaf	ASGV-infected	plantlets	0.101767
SRR767660	leaf	uninfected	fully developed	0
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0.0959471
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0.345632
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0
SRR6308182	young leaf	no	immature leaves	1.32229
SRR3744769	leaf	no	mature	0
SRR3744770	leaf	no	mature	0
SRR3744771	leaf	no	mature	0
SRR5405145	leaf	no	mature	0
SRR6320561	leaf	no	mature	0