Gene ID | Annotation |
---|---|
MD16G1243600 | Transducin/WD40 repeat-like superfamily protein |
Network Category | Global Network | Conditional network (different tissues and developmental stages) |
---|---|---|
Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
Method | Module ID | Function Annotation |
---|---|---|
-- | -- | -- |
more details in UCSC | details of chromatin state |
Gene | Type | Chr | Start | End | Strand |
---|---|---|---|---|---|
MD16G1243600 | mRNA | Chr16 | 26498193 | 26504829 | + |
CDS: |
MD16G1243600 |
Protein: |
MD16G1243600 |
Gene family | Subfamily |
---|---|
Ubiquitin Family | DWD |
Species | Gene ID | Score of Inparanoid | Annotation |
---|---|---|---|
Prunus persica | Prupe.1G071000.1.p | 1 | Transducin/WD40 repeat-like superfamily protein |
Pyrus communis | PCP028406.1 | 1 | - |
Pyrus x bretschneideri | Pbr037646.1 | 1 | - |
Rosa multiflora | Rmu_sc0001200.1_g000049.1 | 1 | - |
Rubus occidentalis | Ro04_G12344 | 1 | - |
Fragaria vesca | mrna24250.1 | 1 | Transducin/WD40 repeat-like superfamily protein |
Vitis vinifera | GSVIVT01038180001 | 1 | Transducin/WD40 repeat-like superfamily protein |
Solanum lycopersicum | Solyc03g059100.1.1 | 1 | Transducin/WD40 repeat-like superfamily protein |
Populus trichocarpa | Potri.019G096900.1 | 1 | Transducin/WD40 repeat-like superfamily protein |
Nicotiana benthamiana | Niben101Scf05468g03005.1 | 1 | WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related LENGTH=554 |
Oryza sativa | LOC_Os06g44370.1 | 1 | "WD domain, G-beta repeat domain containing protein, expressed" |
Zea mays | GRMZM5G829955_P01 | 1 | ; WD repeat-containing protein 57 |
GO term | Description | Category |
---|---|---|
GO:0005515 | protein binding | molecular_function |
KO | Description | Enzyme |
---|---|---|
K12857 | Prp8 binding protein | - |
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
-- | -- | -- | -- | -- |