Detail information of MD16G1282200 Annotation
Gene IDAnnotation
MD16G1282200pentatricopeptide (PPR) repeat-containing protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0086ubiquitin-like-specific protease 1C/D [EC:3.4.22.68]
GTPase

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD16G1282200mRNAChr163845353538457416+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT2G22070.11pentatricopeptide (PPR) repeat-containing protein
Prunus persicaPrupe.3G166700.1.p1pentatricopeptide (PPR) repeat-containing protein
Pyrus communisPCP033282.11-
Rosa multifloraRmu_sc0025044.1_g000002.11-
Rosa multifloraRmu_ssc0000197.1_g000005.11-
Rubus occidentalisRo01_G107461-
Fragaria vescamrna02485.11pentatricopeptide (PPR) repeat-containing protein
Populus trichocarpaPotri.007G085500.11pentatricopeptide (PPR) repeat-containing protein
Oryza sativaLOC_Os03g56400.11"pentatricopeptide, putative, expressed"
Zea maysGRMZM2G471348_P011pentatricopeptide (PPR) repeat-containing protein

Gene Ontology
GO termDescriptionCategory
GO:0005515protein bindingmolecular_function

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern
TOP