Detail information of MD16G1283100 Annotation
Gene IDAnnotation
MD16G1283100Photosystem II reaction center PsbP family protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD16G1283100mRNAChr163960675539608805-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT1G76450.11Photosystem II reaction center PsbP family protein
Prunus persicaPrupe.5G005500.1.p1Photosystem II reaction center PsbP family protein
Prunus persicaPrupe.5G005500.2.p0.826Photosystem II reaction center PsbP family protein
Pyrus communisPCP035640.11-
Pyrus x bretschneideriPbr001201.31-
Rosa multifloraRmu_ssc0000117.1_g000013.11-
Rubus occidentalisRo05_G203881-
Fragaria vescamrna29343.11Photosystem II reaction center PsbP family protein
Vitis viniferaGSVIVT010134270011Photosystem II reaction center PsbP family protein
Solanum lycopersicumSolyc12g094720.1.11Photosystem II reaction center PsbP family protein
Populus trichocarpaPotri.005G256600.21Photosystem II reaction center PsbP family protein
Nicotiana benthamianaNiben101Scf05047g04011.11Phot isoform 1 [Theobroma cacao]
Nicotiana benthamianaNiben101Scf05226g06005.10.653Phot isoform 1 [Theobroma cacao]
Oryza sativaLOC_Os08g40160.11"thylakoid lumen protein, chloroplast precursor, putative,expressed"
Zea maysGRMZM2G172723_P011Thylakoid lumen protein;

Gene Ontology
GO termDescriptionCategory
GO:0019898extrinsic component of membranecellular component
GO:0009654photosystem II oxygen evolving complexcellular component
GO:0015979photosynthesisbiological_process
GO:0005509calcium ion bindingmolecular_function

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern
TOP