Detail information of MD17G1038600 Annotation
Gene IDAnnotation
MD17G1038600RNA ligase/cyclic nucleotide phosphodiesterase family protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0402ATP-dependent RNA helicase DDX35 [EC:3.6.4.13]
BRD
glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8]

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD17G1038600mRNAChr1728017072802264+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT5G40190.11RNA ligase/cyclic nucleotide phosphodiesterase family protein
Prunus persicaPrupe.3G280400.6.p1RNA ligase/cyclic nucleotide phosphodiesterase family protein
Prunus persicaPrupe.3G280400.4.p1RNA ligase/cyclic nucleotide phosphodiesterase family protein
Prunus persicaPrupe.3G280400.2.p1RNA ligase/cyclic nucleotide phosphodiesterase family protein
Prunus persicaPrupe.3G280400.3.p1RNA ligase/cyclic nucleotide phosphodiesterase family protein
Prunus persicaPrupe.3G280400.5.p1RNA ligase/cyclic nucleotide phosphodiesterase family protein
Prunus persicaPrupe.3G280400.12.p1RNA ligase/cyclic nucleotide phosphodiesterase family protein
Pyrus communisPCP002367.11-
Pyrus x bretschneideriPbr005322.11-
Pyrus x bretschneideriPbr001593.11-
Rosa multifloraRmu_sc0003787.1_g000012.11-
Rubus occidentalisRo06_G097351-
Fragaria vescamrna28371.11RNA ligase/cyclic nucleotide phosphodiesterase family protein
Vitis viniferaGSVIVT010325180011RNA ligase/cyclic nucleotide phosphodiesterase family protein
Solanum lycopersicumSolyc02g081950.2.11RNA ligase/cyclic nucleotide phosphodiesterase family protein
Populus trichocarpaPotri.001G350300.11RNA ligase/cyclic nucleotide phosphodiesterase family protein
Nicotiana benthamianaNiben101Scf07755g00003.11RNA ligase/cyclic nucleotide phosphodiesterase family protein LENGTH=183
Nicotiana benthamianaNiben101Scf04081g00002.10.966RNA ligase/cyclic nucleotide phosphodiesterase family protein LENGTH=183
Oryza sativaLOC_Os09g20860.11"calmodulin-binding protein, putative, expressed"
Zea maysGRMZM2G110358_P011-
Zea maysGRMZM2G085022_P011-

Gene Ontology
GO termDescriptionCategory
GO:0016070RNA metabolic processbiological_process
GO:0003824catalytic activitymolecular_function

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern
TOP