Gene ID | Annotation |
---|---|
MD17G1042600 | SIN3-like 2 |
Network Category | Global Network | Conditional network (different tissues and developmental stages) |
---|---|---|
Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
Method | Module ID | Function Annotation |
---|---|---|
Co-expression network | CFinderM0887 | senataxin [EC:3.6.4.-] potassium channel activity SNT |
more details in UCSC | details of chromatin state |
Gene | Type | Chr | Start | End | Strand |
---|---|---|---|---|---|
MD17G1042600 | mRNA | Chr17 | 3112748 | 3120336 | - |
CDS: |
MD17G1042600 |
Protein: |
MD17G1042600 |
Gene family | Subfamily |
---|---|
Transcription Factors Family | Orphans |
Epigenetic Regulators | SNT |
Species | Gene ID | Score of Inparanoid | Annotation |
---|---|---|---|
Arabidopsis thaliana | AT5G15020.2 | 1 | SNL2|SIN3-like 2 |
Arabidopsis thaliana | AT5G15020.1 | 0.992 | SNL2|SIN3-like 2 |
Oryza sativa | LOC_Os05g51110.1 | 1 | expressed protein |
GO term | Description | Category |
---|---|---|
GO:0005634 | nucleus | cellular component |
KO | Description | Enzyme |
---|---|---|
-- | -- | -- |
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
PF08295.8 | Sin3_corepress | 335 | 427 | 2.10E-35 |