Gene detail

Detail information of MD17G1154700 Annotation

Gene ID	Annotation
MD17G1154700	Protein of unknown function

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0088	extracellular region aspartic-type endopeptidase activity regulation of double fertilization forming a zygote and endosperm proteolysis

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD17G1154700	mRNA	Chr17	14748604	14750028	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.3G030600.4.p	1	-
Prunus persica	Prupe.3G030600.2.p	1	-
Prunus persica	Prupe.3G030600.3.p	1	-
Prunus persica	Prupe.3G030600.1.p	1	-
Rosa multiflora	Rmu_sc0002002.1_g000013.1	1	-
Rubus occidentalis	Ro06_G25016	1	-
Fragaria vesca	mrna05477.1	1	-
Vitis vinifera	GSVIVT01016662001	1	-
Solanum lycopersicum	Solyc03g123670.2.1	1	-
Populus trichocarpa	Potri.001G162100.2	1	-
Populus trichocarpa	Potri.003G073200.1	0.685	-
Nicotiana benthamiana	Niben101Scf01283g00015.1	1	conserved hypothetical protein [Ricinus communis] gb\|EEF28568.1\| conserved hypothetical protein [Ricinus communis]

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.22595
SRR5252888	dormant buds	no	dormant buds(0 month)	0.818965
SRR5252889	dormant buds	no	dormant buds(0 month)	0
SRR5252886	dormant buds	no	dormant buds(1 months)	0
SRR5252887	dormant buds	no	dormant buds(1 months)	0
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0
SRR5252883	dormant buds	no	dormant buds(3 months)	0
SRR5252880	dormant buds	no	dormant buds(4 months)	0
SRR5252881	dormant buds	no	dormant buds(4 months)	0
SRR5252878	bud break	no	bud break	0
SRR5252879	bud break	no	bud break	0
SRR3744766	flower	no	mature	0
SRR3744767	flower	no	mature	0
SRR3744768	flower	no	mature	0.0744474
SRR6308190	stigmas	no	open flowers	1.8502
SRR6308181	styles	no	open flowers	1.32302
SRR6308188	filaments	no	open flowers	0.398945
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0.170012
SRR6308194	sepals	no	open flowers	0
SRR6308193	receptacles	no	open flowers	0.131412
SRR6308189	ovaries	no	open flowers	1.60055
SRR3384922	fruit	no	1 week after full bloom	0.368487
SRR3384921	fruit	no	2 week after full bloom	0.498581
SRR3384920	fruit	no	3 week after full bloom	0.439009
SRR3384919	fruit	no	4 week after full bloom	0.486696
SRR3384923	fruit	no	5 week after full bloom	0.462844
SRR3384918	fruit	no	6 week after full bloom	0.343493
SRR3384917	fruit	no	8 week after full bloom	0.371937
SRR3384916	fruit	no	10 week after full bloom	0.241589
SRR3384915	fruit	no	12 week after full bloom	0
SRR3384914	fruit	no	14 week after full bloom	0.0924096
SRR3384913	fruit	no	16 week after full bloom	0.108843
SRR3384912	fruit	no	18 week after full bloom	0.102144
SRR3384911	fruit	no	19 week after full bloom	0.0979677
SRR3384910	fruit	no	20 week after full bloom	0
SRR768128	whole fruit	no	25 days post anthesis	1.21571
SRR768129	whole fruit	no	35 days post anthesis	0.3641
SRR768130	whole fruit	no	60 days post anthesis	0.813932
SRR768131	whole fruit	no	87 days post anthesis	0.153163
SRR7343308	immature fruit flesh	no	immature	1.08985
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	5.65954
SRR1613974	Central seeds	no	20DAPF	5.2031
SRR1613975	Central seeds	no	20DAPF	5.61041
SRR1613976	Lateral seeds	no	20DAPF	4.54678
SRR1613977	Lateral seeds	no	20DAPF	5.52497
SRR1613978	Lateral seeds	no	20DAPF	4.7414
SRR3744786	stem	no	mature	0.215189
SRR3744787	stem	no	mature	0.2557
SRR3744772	stem	no	mature	0.170013
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.125532
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.105556
SRR1089478	leaf	Virus-free	plantlets	0.352184
SRR1089477	leaf	ASGV-infected	plantlets	0
SRR767660	leaf	uninfected	fully developed	0
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0.256394
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0
SRR6308182	young leaf	no	immature leaves	0.22063
SRR3744769	leaf	no	mature	0.0438627
SRR3744770	leaf	no	mature	0
SRR3744771	leaf	no	mature	0
SRR5405145	leaf	no	mature	0
SRR6320561	leaf	no	mature	0