Detail information of MD17G1214100 Annotation
Gene IDAnnotation
MD17G1214100BED zinc finger

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD17G1214100mRNAChr172610387826108371+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT3G42170.11DAYSLEEPER|DAYSLEEPER
Prunus persicaPrupe.3G090000.2.p1BED zinc finger ;hAT family dimerisation domain
Prunus persicaPrupe.3G090000.3.p1BED zinc finger ;hAT family dimerisation domain
Prunus persicaPrupe.3G090000.1.p1BED zinc finger ;hAT family dimerisation domain
Pyrus communisPCP002606.11-
Pyrus communisPCP019598.10.771-
Pyrus x bretschneideriPbr003130.11-
Fragaria vescamrna15718.11BED zinc finger ;hAT family dimerisation domain
Vitis viniferaGSVIVT010155870011BED zinc finger ;hAT family dimerisation domain
Solanum lycopersicumSolyc12g009640.1.11BED zinc finger ;hAT family dimerisation domain
Solanum lycopersicumSolyc10g007810.2.11BED zinc finger ;hAT family dimerisation domain
Solanum lycopersicumSolyc10g007470.2.11BED zinc finger ;hAT family dimerisation domain
Populus trichocarpaPotri.003G031700.11BED zinc finger ;hAT family dimerisation domain
Nicotiana benthamianaNiben101Scf03737g06014.11Zinc finger BED domain-containing protein RICESLEEPER 2
Oryza sativaLOC_Os01g33410.11"transposon protein, putative, unclassified, expressed"
Oryza sativaLOC_Os03g52310.11"transposon protein, putative, unclassified, expressed"
Oryza sativaLOC_Os05g14940.11"transposon protein, putative, unclassified, expressed"

Gene Ontology
GO termDescriptionCategory
GO:0003677DNA bindingmolecular_function
GO:0046983protein dimerization activitymolecular_function

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF02892.11zf-BED30730.00013
PF05699.10Dimer_Tnp_hAT5726572.00E-27


Expression pattern
TOP