Gene detail

Detail information of MD17G1267900 Annotation

Gene ID	Annotation
MD17G1267900	cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0061	4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] 4-hydroxybenzoate nonaprenyltransferase activity

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD17G1267900	mRNA	Chr17	32785543	32793006	+

Sequences

CDS:

MD17G1267900

ATGGCTGAGGCTGTTGTTTCGTTTGTGGCTGTAAGGCTCGGATACTTCATTCAAGAAGCCAAATTCTTGTATGGAGTCGGGGATATCGTTGACTTTGCACAAACCGAGCTACAGTTTATGAGGAGCTTTCTGAAAGATGCAGATAAAAGACAAGAGCATGATGAAACACTACGTATCTGGATTGCTAAAATTGTAGATGCTGCTTATGATCTCGAGGATGTCGTTGAAGCTTATACGTTGAAAGCGGTTTTAAAGAGGAGAGGGGGTATTACGATTACTCTGAAAAGGTTTTCTTGCATCTTGAAAGAAGGAGTTGACCTTCACAAGATTGGTACAGAAATTGAGAACATTACCACCAGAATTTCAAATTTGCGGTCGAGTTTGGAAACTTTCAACCTAAGAGAAATAAGGGAGGACGGAGGTGCCGGTTCCTTGCAATTGTACGAGAGGCAACACCTACTGAGGCGAAGTTACTCTCATGTTATTGAACCTGATATCGTTGGGTTGGAGGACAGTGCGAAGGAAGTGATTATGCAATTGATGAAAGAAGACAAATGCCTTGTTGTTTCGATTTGGGGCAAGGGCGGCTTGGGAAAGACCACTCTTGCGAAACATGTCTATCATCATAGTGAAGTTCGGCACCACTTTGTTGGTTTCGCTTGGGTGTGCGTATCTCAAAGATGTCAAGTTAGAAGTGTTTGGGAAGCAATTTTATTTAAACTCATGTCTCCTACCACTGAGCAAAGAGAAGCAATTGCAAAATGGAGGGATGATGAAATAGCCCAAAAGATTTGTCTTACGCTTCAAGATTCGAGATGTTTGGTGGTCCTTGATGACATTTGGAGCATCGAGGCGTGGGAGTCTTTAAAAGCTGCATTTCCACACGGGGGAACAAAGAGCAGGATATTACTCACCACTCGCAAAAAAGCAGTCGCTTTGTGTGCTGATAGAAATGGTTTCCTCTACCAACCCCGACCACTAAATGAGAACGAAAGTTGGGAACTGCTCAGTAAGATAGCAATTGCTGGAAAGGATGATACAAACTCTAGAAGCTATGCTAAGAAGAAAGAATTAGGAAAGAAGATGCTTCATCACTGTGGAGGTCTCCCATTAGCCATCACTGTGCTTGCAGGACTACTAGTTAGAAAAGACACGGAGAATGAATGGGATATGATGTTAAAAAATGCTGAAGAATACATAAGAAGAGGTGAAGGTCACGAAGAGGAATACGCTGGTTCATTGTGGATCTTGAAATTGAGTTATGATGATTTACCGTATTACTTGAAACTATGCTTTCTATATTTGGCTCATTTTCCTGAGGATTCATCCATACCAGTGAAAAGACTAACTCAGTTAGGCAGAAGGTCTTGTACCTTTCACACAGCTAAGACCTGCAGGTTCATTGGAAACAATGGAGATGTATCATACAGCTGCTTCAATGAATTGGTGGAAAGGTGTATGGTTCAAGTTGGAGATCAAGGTTCGATTAGAAAGATCAAAACTTGCCACCTTCATGATCTTTTGCGAGACTTGTGCTTGTTAAAGGCAGGTGAGGAAAACTTTCTCCAGATTGTGAATTTTTCGCACAGAAATGAGGCAATGTATCTTTTTTCTTCTTCCACGGTAACCAAAGTAGCATCAACGGATAAAGTTAGAAGACTTGCAGTCTATTTGGAGGGGAGTGCTGATAAACTGGTTCCATCAAGAGATGAAAGTAATGTTCACATCAGGTCTTTGTCATACTTTACCCCGGTTGACTGGACACCAAGAAATATAAAGTTACTACGGCCAATTTTCAAGGACTTCAAACTGCTTAGAGTTTTAAAATTGGAAAACATGAAAAGAGTAGTAGAGCTATCGAGGGATATTGGGAGCCTAATCCACTTAAGGTTTTTAAGTTTATTCAACAGTGATATAAGACGGTTGCCATCATCCATAGGTAATCTGTTATGTTTGCAAACTCTAGATTTACGCTTATATGGCTCAACAGTTATCCCAAATGTTATATGGAAGATGGACCAACTGAGACACTTATATTTACCCTTAAACTACAGTATAAGTGATAATGATAAACTAAGATTGGCTCCTCTCCGCAATTTGCAGACGTTACAATATGTTTCAACTCGCTATTCTGATTTGAATGAACTTGCTGATTTGATAAGTCTGAGGAAACTGTTTATAGATGTGTACGAATGTGATTTGAGAAATCTGGAGAAAATCTTCAAGTCTACAAGCCTCAAATTCAACCTTCTTCAGTCCTTATCTGTGCGTAACTTGCGTGTGCAGGACTCGAGAGTTATATTGTTGAGAAAAGCCCTTCCTGGGTTCTTAGTTCCTTTTTTTTCTTGGACTATGGTGGAGGATTCAACGTCAGCAATGGCTAAACTTGAACCATCCAGTGATCCTGCTAGTCCTTTCTTCGTTCATCATTCTGATCACCCGGGAATGATGCTCGTTTCAACCAAACTTACCGGTGAAAATTATGGCACTTGGTGTCGTTCCATGTCAATTGCACTCAGTGCAAAGAACAAATTAGGGTTTGTTGATGGAAGTGTTGAACAGCCATCTGCGAAGACAAAGCCCACAGAATCTGCTCTTTGGCAACGGTGCAACGACATGATCCTTATGTGGATTATCAATACACTTTCCAGCGACCTGGCCACCAGTGTGGTGTACATGACGACAGCCAAAGATGTTTGGGATGATATTCGAGAACGTTTTTCTCAACAAAACGTGTCTCGTCTCTTTGAAATCCAACGTGAACTTGCACGTCTTACACAGAGTCAACAACCTATCAACGTGTATTTCACCAAGCTTAAAGGTTTGTGGGATGAGATGGATTCCTACCAAACTTTAAAGCCGTGTTCTTGCGGGGCTGTTCAATCTAATAACGAACAGGTGGAGAGGACCAAGGTTTTGCAGATTTTAATGGGGTTAGACGACTCGTATTCTGCGATTCGTGGGCAGATCTTACTTATTCAACCATTGCCTTCGATTCGATCTGTCTATTCCATGTTGACACAAGAAGAGAAGCAGAGAGGCATGGCTGTTGGGCCTGGCCTCGTTGAACCTGCAGCTATGGTTGTTCAAACGAACCGTGGCAACAATGGCAACCATGGAAAAGGAAGATCATCCGAGAGGAAGCCACTGCATTGTTCATACTGCGATAAGGATCATCACGTTATTGAAACGTGTTGGAAGCTCCATGGCTATCCACCGGGACATCGTCTTCATGGTAAGTCAAACAGTTCGAGTGGTTCTGGTGGGCGCTCTACCGCTGCACCGAGCGGCAAACCAGCTGTCAACAACGTGGCCTCTCCCGCTGCACCGTCCATGCCCAACCTCACCACCGACCAATTTCAGCAACTCTTATCCATAATGAGTCAAAAGATGGGTCTTGATTCTAAGGCTAATCTAGCAGGTGGGCCTTCTTCTTTCCAATGGGTTATAGACAGTGGTGCCACTGACCACATATCTAGTCTCTCATTGACTAATGCAACCTCCAATCCTCCTCTACCACCTGTGGCATTACCTAATGGGACTCGGGTTCCCATCAATTCTATTGGCACCTACAATTTTGGTTCCCAAATATCTCTTTATAATGTGCTTGGCATAGCTTCTTTTTTGATCAACTTAATTTCCGTTAGTCGGATCACTCGATCATTGAGATGCTCAGTAACCTTTTATCCTGATTTTTGTATTTTACAGGACCTGGAGACGAGGACGATGATTGGTTGGGGGCGACAACATAATGGACTTTACTATTTGGTGGACTCCAAAGGGCGAACATCACCTACACCTCCCAAGGTTTTTTCCGTCACGTGGCACCAACGACTTGGTCATCCTTCACCCTTGAGACTCCAACTTTTAGCTAAACATTTTCCTGAAATTTCCCTTTCTGAAAATAAACCTTGTGACATTTTCCCTTTGGCAAAACAAACTCGATTGTCTTTTGGATTAAGTCATATTAATACTAAGCATGCTTTTGAACTTATACATTGTGATATTTGGGGTCCCCATAGAGTAGCATCCCGTTCGGGTGCTCGTTATTTCCTTACTATTGTTGATGATTTTACTCGTTGCACTTGGGTTTACCTCATGCGTCATAAATCAAACACTCAATCTTTGCTTAAATCTTTCATTGCCTATGCCGAAACACAATTTCACCACAAAATTAAAACCATTAGAACTGACAATGGCGGTGAATTTGTTTCTATGCTTCCTTTCTTTAATGATCATGGCATACTTTTTCAACGCTCTTGTGTTTCCACCCCTCAACAAAATGGGGTTGTGGAGCGAAAGCATAGACATATTCTTCAAACTGCACGAGCTTTGCATTTTCAGTCACATATTCCCTTGCATTTTTGGGATGAATGCATTCTCACATCCATTTACCTCATTAATCGCATTCCCACCCTTCTCTTATCGGGTCTTACGCCTTATGAGAAATTATTTGGTCACCCTCCTTCATATACCCATTTACGCACTTTTGGGTGTTTAGCATATGCCACTAATCTTCACCCCCAACATAAGTTTGATGCTCGGGCTAAAAAATGTGTTTTCATTGGGTATCCTTTTGGCCAAAAAGCTTACAAATTATATGATCTTCATTCCAAACAAATTTTTACTAGTCGAGATGTCACCTTTCATGAGCATATTTTTCCATTCCACCCAAATCCTCACCCAAATCCGCACCCACATACTGACCCAAACACTGTCCCACACACCGACCCCTATACTGATCCCCATGCCGACCCAGGCCCACTTCCCTCTCCACATGTTACCGTCCCCATCCCTTCCCACATAGACCACCACCCTACCGACCCGGGCCTTTCTCCTGGCCCAGCACCAGTCCCCAAACTACCCACCTCTGCTACTGACGGGCTTGACCAAGTCTCGGTTCTTCCTGGTGGGCCTGCTCTCTCTCTGGACCCGTGTCCACCATCTGCCCAGCCTGCCGCTGCATCCCCTGCTCCTTTGCGCCATTCCAGTCGCATCCGAGTTCCGCCGACCAAGCTCCATGATTATGTTTGTCCGACTATTCCGTTGCCCCCCGCCAACTCCTCGCCTTCCGGTCCTCGTACAAGGTATCCTCTTTCTAATTATTTGTCCTATCAAGGGCTCTCTCCTAAGTATCAATCCTTCATTGCACAATTGTCTACTGTTTTGGAGCCTAACAGTTATACAGAAGCTGCCAAACATCCCCATTGGTGCAAGGCCATGGACGAGGAACTCCAGGCTCTTCAGGCCAATGACACTTGGACACTTTCTCCTCTCCCTTCCGGGAAGGTACCCATTGGTTGTCGGTGGGTTTATAAAATCAAAAGAAAATCTGATGGGAGTATTGAGCGTTACAAAGCTCGGTTGGTTGCTAAAGGTTACACCCAATTGGAAGGTATTGACTATCATGATACCTTTTCTCCCACTGCTAAACTTGTCACTTTCCGCTGCTTACTTGCTCTTGCTGCTACTCACTCCTGGTCACTTCATCACCTTGATGTCCATAACGCATTCCTTCATGGTGATCTCATGGAGGAAATCTACATGCTTCCCCCGCCTGGTCTTCGGCGACAGGGGGAGAATTTGGTGTGTCGCCTTCATAAGTCAATTTATGGGTTGAAGCAAGCTTCTCGGCAATGGTTTTTCAAGTTCTCACAAGCTATTCGATCAGCTGGTTATGTTCAATCTAAAGCAGACTACTCACTTTTCACTAAGAGAAGAGGGAAGTCATTTACTGTGCTTCTCATCTATGTGGATGACATACTGATAACGGGGAATGACTTGAAAGCAATTGATGATCTCAAATCTTTTTTTAATACCAAGTTTCGTATCAAAGATCTTGGTAATTTGAAATATTTTTTGGGAATTGAGGTGGCACGATCGAAACAAGGTATTTTCATTTCACAAAGAAAGTATTTATTGGATATCCTAAATGATGTTGGTTTTCTAGGATCACGGCCTGCAAGCTTTCCTATGGAACAAAATCTCAAATTACTCCCTGATGATGGGCATGCATTGGATGATCCAGTCAAGTACAGAAGATTGATTGGTCGGTTGATATATCTCACTATAACCCGACCGGATATTACATATTCAGTTCATTTATTGAGTAGATTCATGCAATCACCTCAAAAGTCTCATTATGAAGCTGCTTTACGCATCTTGAAGTATTTGAAAGGCACACCAGGGCAAGGCATGATGTTTCCATCTCAAAATTCATTGAAGTTAAAGGCATATTGTGATTCCGATTGGGCAGGATGTCCTACCACTCGACGTTCCACTACTGGTTATTGCGTTTTCCTTGGAAATAGCCTTATTTCATGGAAAAGCAAACGACAGAAAACTGTATCCTTATCTTCTGCTGAAGCAGAATATAGATCCATGGCAGCAGCATGTTGTGAGCTTGCATGGCTCCAAAGCCTTTTTCGAGATCTTCAAGTTCAAGACCAAGGGCCGGCTACCTTATTATGCGACAATCAAGCCGCTCTTCATATTGCGGCAAATCCGGTATTTCACGAGCGAACAAGGCACATTGAGATTGATTGTCATTTTGTTCGAGATAAGATTATGGAAGGAAAAATTGTGACGGGATTTGTTCCTTCCATATCACAACTTGCTGATTTGTTCACTAAAGCTCTTGGGAAGGAAAGATTTCATTCTTTGCTAGGCAAGTTGGGAGTTCGAAACATTCACTCACCAACTTGA

Protein:

MD17G1267900

MAEAVVSFVAVRLGYFIQEAKFLYGVGDIVDFAQTELQFMRSFLKDADKRQEHDETLRIWIAKIVDAAYDLEDVVEAYTLKAVLKRRGGITITLKRFSCILKEGVDLHKIGTEIENITTRISNLRSSLETFNLREIREDGGAGSLQLYERQHLLRRSYSHVIEPDIVGLEDSAKEVIMQLMKEDKCLVVSIWGKGGLGKTTLAKHVYHHSEVRHHFVGFAWVCVSQRCQVRSVWEAILFKLMSPTTEQREAIAKWRDDEIAQKICLTLQDSRCLVVLDDIWSIEAWESLKAAFPHGGTKSRILLTTRKKAVALCADRNGFLYQPRPLNENESWELLSKIAIAGKDDTNSRSYAKKKELGKKMLHHCGGLPLAITVLAGLLVRKDTENEWDMMLKNAEEYIRRGEGHEEEYAGSLWILKLSYDDLPYYLKLCFLYLAHFPEDSSIPVKRLTQLGRRSCTFHTAKTCRFIGNNGDVSYSCFNELVERCMVQVGDQGSIRKIKTCHLHDLLRDLCLLKAGEENFLQIVNFSHRNEAMYLFSSSTVTKVASTDKVRRLAVYLEGSADKLVPSRDESNVHIRSLSYFTPVDWTPRNIKLLRPIFKDFKLLRVLKLENMKRVVELSRDIGSLIHLRFLSLFNSDIRRLPSSIGNLLCLQTLDLRLYGSTVIPNVIWKMDQLRHLYLPLNYSISDNDKLRLAPLRNLQTLQYVSTRYSDLNELADLISLRKLFIDVYECDLRNLEKIFKSTSLKFNLLQSLSVRNLRVQDSRVILLRKALPGFLVPFFSWTMVEDSTSAMAKLEPSSDPASPFFVHHSDHPGMMLVSTKLTGENYGTWCRSMSIALSAKNKLGFVDGSVEQPSAKTKPTESALWQRCNDMILMWIINTLSSDLATSVVYMTTAKDVWDDIRERFSQQNVSRLFEIQRELARLTQSQQPINVYFTKLKGLWDEMDSYQTLKPCSCGAVQSNNEQVERTKVLQILMGLDDSYSAIRGQILLIQPLPSIRSVYSMLTQEEKQRGMAVGPGLVEPAAMVVQTNRGNNGNHGKGRSSERKPLHCSYCDKDHHVIETCWKLHGYPPGHRLHGKSNSSSGSGGRSTAAPSGKPAVNNVASPAAPSMPNLTTDQFQQLLSIMSQKMGLDSKANLAGGPSSFQWVIDSGATDHISSLSLTNATSNPPLPPVALPNGTRVPINSIGTYNFGSQISLYNVLGIASFLINLISVSRITRSLRCSVTFYPDFCILQDLETRTMIGWGRQHNGLYYLVDSKGRTSPTPPKVFSVTWHQRLGHPSPLRLQLLAKHFPEISLSENKPCDIFPLAKQTRLSFGLSHINTKHAFELIHCDIWGPHRVASRSGARYFLTIVDDFTRCTWVYLMRHKSNTQSLLKSFIAYAETQFHHKIKTIRTDNGGEFVSMLPFFNDHGILFQRSCVSTPQQNGVVERKHRHILQTARALHFQSHIPLHFWDECILTSIYLINRIPTLLLSGLTPYEKLFGHPPSYTHLRTFGCLAYATNLHPQHKFDARAKKCVFIGYPFGQKAYKLYDLHSKQIFTSRDVTFHEHIFPFHPNPHPNPHPHTDPNTVPHTDPYTDPHADPGPLPSPHVTVPIPSHIDHHPTDPGLSPGPAPVPKLPTSATDGLDQVSVLPGGPALSLDPCPPSAQPAAASPAPLRHSSRIRVPPTKLHDYVCPTIPLPPANSSPSGPRTRYPLSNYLSYQGLSPKYQSFIAQLSTVLEPNSYTEAAKHPHWCKAMDEELQALQANDTWTLSPLPSGKVPIGCRWVYKIKRKSDGSIERYKARLVAKGYTQLEGIDYHDTFSPTAKLVTFRCLLALAATHSWSLHHLDVHNAFLHGDLMEEIYMLPPPGLRRQGENLVCRLHKSIYGLKQASRQWFFKFSQAIRSAGYVQSKADYSLFTKRRGKSFTVLLIYVDDILITGNDLKAIDDLKSFFNTKFRIKDLGNLKYFLGIEVARSKQGIFISQRKYLLDILNDVGFLGSRPASFPMEQNLKLLPDDGHALDDPVKYRRLIGRLIYLTITRPDITYSVHLLSRFMQSPQKSHYEAALRILKYLKGTPGQGMMFPSQNSLKLKAYCDSDWAGCPTTRRSTTGYCVFLGNSLISWKSKRQKTVSLSSAEAEYRSMAAACCELAWLQSLFRDLQVQDQGPATLLCDNQAALHIAANPVFHERTRHIEIDCHFVRDKIMEGKIVTGFVPSISQLADLFTKALGKERFHSLLGKLGVRNIHSPT

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Vitis vinifera	GSVIVT01032828001	1	Disease resistance protein (CC-NBS-LRR class) family
Oryza sativa	LOC_Os02g06230.1	1	"retrotransposon protein, putative, unclassified"
Oryza sativa	LOC_Os08g29560.1	1	"retrotransposon protein, putative, unclassified, expressed"

Gene Ontology

GO term	Description	Category
GO:0043531	ADP binding	molecular_function
GO:0003676	nucleic acid binding	molecular_function
GO:0006952	defense response	biological_process
GO:0015074	DNA integration	biological_process

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00931.18	NB-ARC	170	452	4.00E-67
PF13976.2	gag_pre-integrs	1272	1313	6.30E-08
PF00665.22	rve	1326	1440	6.10E-21

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.0900717
SRR5252888	dormant buds	no	dormant buds(0 month)	0
SRR5252889	dormant buds	no	dormant buds(0 month)	0.0395016
SRR5252886	dormant buds	no	dormant buds(1 months)	0
SRR5252887	dormant buds	no	dormant buds(1 months)	0
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0
SRR5252883	dormant buds	no	dormant buds(3 months)	0
SRR5252880	dormant buds	no	dormant buds(4 months)	0
SRR5252881	dormant buds	no	dormant buds(4 months)	0.0136135
SRR5252878	bud break	no	bud break	0.0244324
SRR5252879	bud break	no	bud break	0.0270929
SRR3744766	flower	no	mature	0.0556635
SRR3744767	flower	no	mature	0.0662
SRR3744768	flower	no	mature	0.0879938
SRR6308190	stigmas	no	open flowers	0.118728
SRR6308181	styles	no	open flowers	0
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	1.08335
SRR6308192	pollen	no	open flowers	7.62549
SRR6308191	petals	no	open flowers	0.0218674
SRR6308194	sepals	no	open flowers	0.0211874
SRR6308193	receptacles	no	open flowers	0.050702
SRR6308189	ovaries	no	open flowers	0
SRR3384922	fruit	no	1 week after full bloom	0.0230066
SRR3384921	fruit	no	2 week after full bloom	0
SRR3384920	fruit	no	3 week after full bloom	0.0219277
SRR3384919	fruit	no	4 week after full bloom	0.020258
SRR3384923	fruit	no	5 week after full bloom	0.00963258
SRR3384918	fruit	no	6 week after full bloom	0
SRR3384917	fruit	no	8 week after full bloom	0
SRR3384916	fruit	no	10 week after full bloom	0
SRR3384915	fruit	no	12 week after full bloom	0
SRR3384914	fruit	no	14 week after full bloom	0
SRR3384913	fruit	no	16 week after full bloom	0.0135913
SRR3384912	fruit	no	18 week after full bloom	0
SRR3384911	fruit	no	19 week after full bloom	0
SRR3384910	fruit	no	20 week after full bloom	0
SRR768128	whole fruit	no	25 days post anthesis	0.0555714
SRR768129	whole fruit	no	35 days post anthesis	0
SRR768130	whole fruit	no	60 days post anthesis	0
SRR768131	whole fruit	no	87 days post anthesis	0.0192534
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0.0136871
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	0
SRR1613974	Central seeds	no	20DAPF	0
SRR1613975	Central seeds	no	20DAPF	0.00322063
SRR1613976	Lateral seeds	no	20DAPF	0
SRR1613977	Lateral seeds	no	20DAPF	0.00589647
SRR1613978	Lateral seeds	no	20DAPF	0.003009
SRR3744786	stem	no	mature	0.046849
SRR3744787	stem	no	mature	0.0463082
SRR3744772	stem	no	mature	0.0872452
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.0393238
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.00449131
SRR1089478	leaf	Virus-free	plantlets	0.0222417
SRR1089477	leaf	ASGV-infected	plantlets	0.0517581
SRR767660	leaf	uninfected	fully developed	0.0677402
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0.345402
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0.619549
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.143912
SRR6308182	young leaf	no	immature leaves	0
SRR3744769	leaf	no	mature	0.0480147
SRR3744770	leaf	no	mature	0.0446518
SRR3744771	leaf	no	mature	0.0329048
SRR5405145	leaf	no	mature	0.0394591
SRR6320561	leaf	no	mature	0