Gene detail

Detail information of MD00G1029100 Annotation

Gene ID	Annotation
MD00G1029100	aldehyde dehydrogenase 3H1

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0216

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD00G1029100	mRNA	Chr00	4760820	4767160	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.1G493800.1.p	1	aldehyde dehydrogenase 3H1
Pyrus communis	PCP012222.1	1	-
Pyrus x bretschneideri	Pbr023012.1	1	-
Pyrus x bretschneideri	Pbr023028.1	1	-
Rubus occidentalis	Ro02_G01466	1	-
Fragaria vesca	mrna11216.1	1	aldehyde dehydrogenase 3H1
Populus trichocarpa	Potri.005G179300.3	1	aldehyde dehydrogenase 3H1
Oryza sativa	LOC_Os12g07810.1	1	"aldehyde dehydrogenase, putative, expressed"

Gene Ontology

GO term	Description	Category
GO:0004030	aldehyde dehydrogenase [NAD(P)+] activity	molecular_function
GO:0006081	cellular aldehyde metabolic process	biological_process
GO:0055114	oxidation-reduction process	biological_process

KEGG

KO	Description	Enzyme
K00128	aldehyde dehydrogenase (NAD+)	EC:1.2.1.3

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	17.8624
SRR5252888	dormant buds	no	dormant buds(0 month)	22.9776
SRR5252889	dormant buds	no	dormant buds(0 month)	15.321
SRR5252886	dormant buds	no	dormant buds(1 months)	16.7438
SRR5252887	dormant buds	no	dormant buds(1 months)	25.4305
SRR5252884	dormant buds	no	dormant buds(2 months)	25.5388
SRR5252882	dormant buds	no	dormant buds(3 months)	23.303
SRR5252883	dormant buds	no	dormant buds(3 months)	36.8298
SRR5252880	dormant buds	no	dormant buds(4 months)	27.1006
SRR5252881	dormant buds	no	dormant buds(4 months)	32.9073
SRR5252878	bud break	no	bud break	13.1136
SRR5252879	bud break	no	bud break	9.81824
SRR3744766	flower	no	mature	42.1835
SRR3744767	flower	no	mature	43.831
SRR3744768	flower	no	mature	44.502
SRR6308190	stigmas	no	open flowers	21.538
SRR6308181	styles	no	open flowers	19.0576
SRR6308188	filaments	no	open flowers	16.033
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	15.9376
SRR6308192	pollen	no	open flowers	15.0977
SRR6308191	petals	no	open flowers	12.7781
SRR6308194	sepals	no	open flowers	24.9311
SRR6308193	receptacles	no	open flowers	27.5359
SRR6308189	ovaries	no	open flowers	19.4042
SRR3384922	fruit	no	1 week after full bloom	9.23995
SRR3384921	fruit	no	2 week after full bloom	8.44043
SRR3384920	fruit	no	3 week after full bloom	3.52266
SRR3384919	fruit	no	4 week after full bloom	4.68318
SRR3384923	fruit	no	5 week after full bloom	4.64238
SRR3384918	fruit	no	6 week after full bloom	5.20994
SRR3384917	fruit	no	8 week after full bloom	4.12487
SRR3384916	fruit	no	10 week after full bloom	2.91568
SRR3384915	fruit	no	12 week after full bloom	1.95799
SRR3384914	fruit	no	14 week after full bloom	2.66761
SRR3384913	fruit	no	16 week after full bloom	2.44969
SRR3384912	fruit	no	18 week after full bloom	2.84865
SRR3384911	fruit	no	19 week after full bloom	4.69745
SRR3384910	fruit	no	20 week after full bloom	6.38015
SRR768128	whole fruit	no	25 days post anthesis	5.86275
SRR768129	whole fruit	no	35 days post anthesis	5.90165
SRR768130	whole fruit	no	60 days post anthesis	4.69747
SRR768131	whole fruit	no	87 days post anthesis	6.01843
SRR7343308	immature fruit flesh	no	immature	8.25267
SRR7343309	immature fruit flesh	no	immature	10.6241
SRR6320494	ripe fruit flesh	no	mature	17.8539
SRR5405143	ripe fruit peel	no	mature	15.5903
SRR6320572	ripe fruit peel	no	mature	11.0784
SRR7403504	fruit	uninfected	mature	26.0642
SRR7403506	fruit	uninfected	mature	25.7874
SRR7403507	fruit	uninfected	mature	24.369
SRR7403500	fruit	infected with penicillium expansum	mature	42.7093
SRR7403501	fruit	infected with penicillium expansum	mature	41.3889
SRR7403508	fruit	infected with penicillium expansum	mature	46.7283
SRR7403502	fruit	infected with penicillium expansum	mature	37.894
SRR7403503	fruit	infected with penicillium expansum	mature	37.4226
SRR7403505	fruit	infected with penicillium expansum	mature	36.4864
SRR1613973	Central seeds	no	20DAPF	6.0056
SRR1613974	Central seeds	no	20DAPF	6.67005
SRR1613975	Central seeds	no	20DAPF	5.94079
SRR1613976	Lateral seeds	no	20DAPF	7.23318
SRR1613977	Lateral seeds	no	20DAPF	7.17445
SRR1613978	Lateral seeds	no	20DAPF	7.27539
SRR3744786	stem	no	mature	48.1941
SRR3744787	stem	no	mature	50.0028
SRR3744772	stem	no	mature	45.9982
SRX765691	seedling shoot apex	no	4-6 week old seedling	9.71866
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	7.35827
SRR1089478	leaf	Virus-free	plantlets	14.2243
SRR1089477	leaf	ASGV-infected	plantlets	16.4831
SRR767660	leaf	uninfected	fully developed	15.0464
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	6.94015
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	11.2143
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	15.9127
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	12.1319
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	17.1859
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	19.4557
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	29.2804
SRR6308182	young leaf	no	immature leaves	15.0524
SRR3744769	leaf	no	mature	31.7406
SRR3744770	leaf	no	mature	32.6604
SRR3744771	leaf	no	mature	32.0197
SRR5405145	leaf	no	mature	21.9125
SRR6320561	leaf	no	mature	21.0453