Detail information of MD00G1115000 Annotation
Gene IDAnnotation
MD00G1115000Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0321CYP86A89
CYP86A74
CYP86A29
fatty acid omega-hydroxylase [EC:1.14.-.-]
UV excision repair protein RAD23
thermospermine synthase [EC:2.5.1.79]

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD00G1115000mRNAChr002447554224478541+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Prunus persicaPrupe.5G072500.1.p1-
Prunus persicaPrupe.5G072500.2.p0.924-
Pyrus communisPCP010933.11-
Pyrus x bretschneideriPbr014012.11-
Pyrus x bretschneideriPbr014009.11-
Rubus occidentalisRo05_G308291-
Fragaria vescamrna31757.11-
Vitis viniferaGSVIVT010013060011-
Solanum lycopersicumSolyc08g078840.2.11-
Populus trichocarpaPotri.001G122600.11-
Nicotiana benthamianaNiben101Scf08640g00002.11Root meristem growth factor 6
Nicotiana benthamianaNiben101Scf13429g04021.10.79Root meristem growth factor 6

Gene Ontology
GO termDescriptionCategory
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KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern
TOP