Gene detail

Detail information of MD02G1030600 Annotation

Gene ID	Annotation
MD02G1030600	Protein of unknown function

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0623	detection of temperature stimulus regulation of DNA methylation HTA histone H2A chromatin remodeling nucleosome chlorophyllase [EC:3.1.1.14] ubiquitin carboxyl-terminal hydrolase L5 [EC:3.4.19.12] UCH

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD02G1030600	mRNA	Chr02	2392016	2393109	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.7G243900.1.p	1	-
Pyrus communis	PCP017392.1	1	-
Pyrus x bretschneideri	Pbr003166.1	1	-
Rubus occidentalis	Ro01_G10358	1	-
Fragaria vesca	mrna31043.1	1	-
Vitis vinifera	GSVIVT01015544001	1	-
Solanum lycopersicum	Solyc07g008280.2.1	1	-
Populus trichocarpa	Potri.006G069100.1	1	-
Populus trichocarpa	Potri.018G131100.1	0.758	-
Nicotiana benthamiana	Niben101Scf04852g00006.1	1	conserved hypothetical protein [Ricinus communis] gb\|EEF37943.1\| conserved hypothetical protein [Ricinus communis]
Oryza sativa	LOC_Os02g10730.1	1	expressed protein
Oryza sativa	LOC_Os06g40210.1	1	expressed protein
Zea mays	GRMZM2G111987_P01	1	Putative
Zea mays	GRMZM2G132095_P01	1	Putative

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	3.73643
SRR5252888	dormant buds	no	dormant buds(0 month)	5.71346
SRR5252889	dormant buds	no	dormant buds(0 month)	5.4053
SRR5252886	dormant buds	no	dormant buds(1 months)	1.69349
SRR5252887	dormant buds	no	dormant buds(1 months)	2.95689
SRR5252884	dormant buds	no	dormant buds(2 months)	1.64249
SRR5252882	dormant buds	no	dormant buds(3 months)	2.26508
SRR5252883	dormant buds	no	dormant buds(3 months)	4.93637
SRR5252880	dormant buds	no	dormant buds(4 months)	2.87708
SRR5252881	dormant buds	no	dormant buds(4 months)	3.19344
SRR5252878	bud break	no	bud break	3.8891
SRR5252879	bud break	no	bud break	4.31259
SRR3744766	flower	no	mature	4.25268
SRR3744767	flower	no	mature	4.69829
SRR3744768	flower	no	mature	4.41504
SRR6308190	stigmas	no	open flowers	0.161119
SRR6308181	styles	no	open flowers	0
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.856739
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	0.172212
SRR6308193	receptacles	no	open flowers	0.137309
SRR6308189	ovaries	no	open flowers	0.334443
SRR3384922	fruit	no	1 week after full bloom	1.83168
SRR3384921	fruit	no	2 week after full bloom	1.56527
SRR3384920	fruit	no	3 week after full bloom	2.57273
SRR3384919	fruit	no	4 week after full bloom	3.31057
SRR3384923	fruit	no	5 week after full bloom	2.26034
SRR3384918	fruit	no	6 week after full bloom	1.43784
SRR3384917	fruit	no	8 week after full bloom	0.518968
SRR3384916	fruit	no	10 week after full bloom	0.421364
SRR3384915	fruit	no	12 week after full bloom	0.299132
SRR3384914	fruit	no	14 week after full bloom	0.290115
SRR3384913	fruit	no	16 week after full bloom	0.113902
SRR3384912	fruit	no	18 week after full bloom	0.106892
SRR3384911	fruit	no	19 week after full bloom	0.205043
SRR3384910	fruit	no	20 week after full bloom	0.240815
SRR768128	whole fruit	no	25 days post anthesis	0.693697
SRR768129	whole fruit	no	35 days post anthesis	2.03142
SRR768130	whole fruit	no	60 days post anthesis	2.5544
SRR768131	whole fruit	no	87 days post anthesis	0.640906
SRR7343308	immature fruit flesh	no	immature	2.85167
SRR7343309	immature fruit flesh	no	immature	1.13941
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.160167
SRR7403506	fruit	uninfected	mature	0.50758
SRR7403507	fruit	uninfected	mature	0.0669629
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0.204769
SRR7403508	fruit	infected with penicillium expansum	mature	0.147617
SRR7403502	fruit	infected with penicillium expansum	mature	0.342387
SRR7403503	fruit	infected with penicillium expansum	mature	0.254946
SRR7403505	fruit	infected with penicillium expansum	mature	0.114583
SRR1613973	Central seeds	no	20DAPF	0.629081
SRR1613974	Central seeds	no	20DAPF	1.02155
SRR1613975	Central seeds	no	20DAPF	0.800141
SRR1613976	Lateral seeds	no	20DAPF	0.799562
SRR1613977	Lateral seeds	no	20DAPF	0.716189
SRR1613978	Lateral seeds	no	20DAPF	0.622969
SRR3744786	stem	no	mature	3.6544
SRR3744787	stem	no	mature	4.28917
SRR3744772	stem	no	mature	3.65391
SRX765691	seedling shoot apex	no	4-6 week old seedling	2.6791
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	4.89152
SRR1089478	leaf	Virus-free	plantlets	4.60415
SRR1089477	leaf	ASGV-infected	plantlets	5.85708
SRR767660	leaf	uninfected	fully developed	1.11983
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	2.81328
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	14.4704
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	1.69242
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	1.9631
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	2.14236
SRR6308182	young leaf	no	immature leaves	5.76296
SRR3744769	leaf	no	mature	3.53943
SRR3744770	leaf	no	mature	4.3349
SRR3744771	leaf	no	mature	4.23197
SRR5405145	leaf	no	mature	3.61993
SRR6320561	leaf	no	mature	8.88391