Gene ID | Annotation |
---|---|
MD02G1171300 | redox responsive transcription factor 1 |
Network Category | Global Network | Conditional network (different tissues and developmental stages) |
---|---|---|
Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
Method | Module ID | Function Annotation |
---|---|---|
Co-expression network | CFinderM0058 | ubiquitin ligase complex regulation of seed germination U-box protein ubiquitination |
more details in UCSC | details of chromatin state |
Gene | Type | Chr | Start | End | Strand |
---|---|---|---|---|---|
MD02G1171300 | mRNA | Chr02 | 14850163 | 14850729 | - |
CDS: |
MD02G1171300 |
Protein: |
MD02G1171300 |
Gene family | Subfamily |
---|---|
Transcription Factors Family | ERF |
Species | Gene ID | Score of Inparanoid | Annotation |
---|---|---|---|
Pyrus communis | PCP024134.1 | 1 | - |
Pyrus x bretschneideri | Pbr025136.1 | 1 | - |
Rosa multiflora | Rmu_sc0001051.1_g000001.1 | 1 | - |
Rosa multiflora | Rmu_co8328685.1_g000001.1 | 1 | - |
Fragaria vesca | mrna24044.1 | 1 | redox responsive transcription factor 1 |
Oryza sativa | LOC_Os09g28440.1 | 1 | "AP2 domain containing protein, expressed" |
Oryza sativa | LOC_Os08g36920.1 | 1 | "AP2 domain containing protein, expressed" |
Zea mays | GRMZM2G138396_P01 | 1 | - |
Zea mays | GRMZM2G369472_P01 | 1 | AP2 domain containing protein |
GO term | Description | Category |
---|---|---|
GO:0003700 | transcription factor activity, sequence-specific DNA binding | molecular_function |
GO:0003677 | DNA binding | molecular_function |
KO | Description | Enzyme |
---|---|---|
-- | -- | -- |
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
PF00847.16 | AP2 | 121 | 170 | 4.10E-14 |