| Gene ID | Annotation |
|---|---|
| MD02G1267100 | Adaptin family protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0225 | cytosol nuclear pore ARF guanyl-nucleotide exchange factor activity regulation of catalytic activity regulation of ARF protein signal transduction protein import into nucleus endocytosis tRNA binding nucleobase-containing compound transmembrane transporter activity plasmodesma vesicle-mediated transport clathrin coat of trans-Golgi network vesicle tRNA export from nucleus positive regulation of organelle organization protein transporter activity clathrin coat of coated pit 1 eukaryotic translation initiation factor 3 complex early endosome exportin-T brefeldin A-inhibited guanine nucleotide-exchange protein vegetative to reproductive phase transition of meristem clathrin heavy chain |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD02G1267100 | mRNA | Chr02 | 32138508 | 32147146 | + |
| CDS: |
| MD02G1267100 |
| Protein: |
| MD02G1267100 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT1G31730.1 | 1 | Adaptin family protein |
| Pyrus communis | PCP024828.1 | 1 | - |
| Pyrus x bretschneideri | Pbr024751.1 | 1 | - |
| Rosa multiflora | Rmu_sc0004129.1_g000014.1 | 1 | - |
| Rosa multiflora | Rmu_sc0015060.1_g000011.1 | 0.701 | - |
| Vitis vinifera | GSVIVT01036887001 | 1 | Adaptin family protein |
| Solanum lycopersicum | Solyc08g075310.2.1 | 1 | Adaptin family protein |
| Solanum lycopersicum | Solyc05g005780.2.1 | 1 | "Adaptor protein complex AP-1, gamma subunit" |
| Solanum lycopersicum | Solyc06g074650.2.1 | 1 | "Adaptor protein complex AP-2, alpha subunit" |
| Solanum lycopersicum | Solyc03g119270.1.1 | 1 | delta-adaptin |
| Populus trichocarpa | Potri.004G235200.1 | 1 | Adaptin family protein |
| Nicotiana benthamiana | Niben101Scf11960g01001.1 | 1 | AP-4 complex subunit epsilon |
| Oryza sativa | LOC_Os01g68750.1 | 1 | "adaptin, putative, expressed" |
| Zea mays | GRMZM2G031352_P01 | 1 | - |
| GO term | Description | Category |
|---|---|---|
| GO:0005488 | binding | molecular_function |
| GO:0006886 | intracellular protein transport | biological_process |
| GO:0030117 | membrane coat | cellular component |
| GO:0016192 | vesicle-mediated transport | biological_process |
| KO | Description | Enzyme |
|---|---|---|
| K12400 | AP-4 complex subunit epsilon-1 | - |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
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