| Gene ID | Annotation |
|---|---|
| MD03G1280500 | Peptide chain release factor 1 |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0673 | thylakoid membrane organization chloroplast relocation carotenoid biosynthetic process ncRNA metabolic process translation release factor activity transcription from plastid promoter plastid translation translational termination heme biosynthetic process vesicle organization plastid sigma factor activity sigma factor activity glutamine biosynthetic process pentose-phosphate shunt regulation of RNA biosynthetic process cellular response to light stimulus isopentenyl diphosphate biosynthetic process |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD03G1280500 | mRNA | Chr03 | 36166350 | 36170436 | + |
| CDS: |
| MD03G1280500 |
| Protein: |
| MD03G1280500 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT3G62910.1 | 1 | APG3;AtcpRF1;cpRF1|ALBINO AND PALE GREEN;Arabidopsis thaliana chloroplast RF1;chloroplast ribosome release factor 1 |
| Pyrus communis | PCP005507.1 | 1 | - |
| Pyrus x bretschneideri | Pbr022800.1 | 1 | - |
| Rosa multiflora | Rmu_sc0001788.1_g000007.1 | 1 | - |
| Rubus occidentalis | Ro02_G07066 | 1 | - |
| Fragaria vesca | mrna24931.1 | 1 | Peptide chain release factor 1 |
| Vitis vinifera | GSVIVT01010979001 | 1 | Peptide chain release factor 1 |
| Solanum lycopersicum | Solyc09g074650.2.1 | 1 | Peptide chain release factor 1 |
| Solanum lycopersicum | Solyc03g078020.2.1 | 1 | Peptide chain release factor 1 |
| Populus trichocarpa | Potri.014G133400.1 | 1 | Peptide chain release factor 1 |
| Nicotiana benthamiana | Niben101Scf08264g00008.1 | 1 | Peptide chain release factor 1 LENGTH=422 |
| Oryza sativa | LOC_Os11g43600.1 | 1 | "peptide chain release factor protein, putative, expressed" |
| GO term | Description | Category |
|---|---|---|
| GO:0005737 | cytoplasm | cellular component |
| GO:0006415 | translational termination | biological_process |
| GO:0003747 | translation release factor activity | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03462.14 | PCRF | 63 | 256 | 3.10E-64 |
 |