| Gene ID | Annotation |
|---|---|
| MD04G1000700 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0163 | pyrimidine ribonucleotide biosynthetic process |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD04G1000700 | mRNA | Chr04 | 67771 | 71174 | + |
| CDS: |
| MD04G1000700 |
| Protein: |
| MD04G1000700 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT5G58130.1 | 1 | ROS3|REPRESSOR OF SILENCING 3 |
| Prunus persica | Prupe.1G000700.1.p | 1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Pyrus communis | PCP009229.1 | 1 | - |
| Pyrus x bretschneideri | Pbr019511.3 | 1 | - |
| Rosa multiflora | Rmu_sc0001322.1_g000020.1 | 1 | - |
| Rubus occidentalis | Ro04_G14913 | 1 | - |
| Fragaria vesca | mrna29869.1 | 1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Vitis vinifera | GSVIVT01038350001 | 1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Solanum lycopersicum | Solyc07g042700.2.1 | 1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Populus trichocarpa | Potri.018G151300.1 | 1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Nicotiana benthamiana | Niben101Scf12695g00005.1 | 1 | "Hsp27-ERE-TATA-binding protein/Scaffold attachment factor (SAF-B) (ISS) [Ostreococcus tauri] emb|CAL52065.1| Nucleotide-binding, alpha-beta plait [Ostreococcus tauri]" |
| Nicotiana benthamiana | Niben101Scf02836g00008.1 | 1 | Nucleolar protein 8 |
| Oryza sativa | LOC_Os02g04560.1 | 1 | "marker Xucw84, putative, expressed" |
| Zea mays | GRMZM2G169998_P01 | 1 | - |
| GO term | Description | Category |
|---|---|---|
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF14259.2 | RRM_6 | 36 | 104 | 2.60E-07 |
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