| Gene ID | Annotation |
|---|---|
| MD04G1196800 | eukaryotic translation initiation factor 3A |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0225 | cytosol nuclear pore ARF guanyl-nucleotide exchange factor activity regulation of catalytic activity regulation of ARF protein signal transduction protein import into nucleus endocytosis tRNA binding nucleobase-containing compound transmembrane transporter activity plasmodesma vesicle-mediated transport clathrin coat of trans-Golgi network vesicle tRNA export from nucleus positive regulation of organelle organization protein transporter activity clathrin coat of coated pit 1 eukaryotic translation initiation factor 3 complex early endosome exportin-T brefeldin A-inhibited guanine nucleotide-exchange protein vegetative to reproductive phase transition of meristem clathrin heavy chain |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD04G1196800 | mRNA | Chr04 | 28498868 | 28505419 | - |
| CDS: |
| MD04G1196800 |
| Protein: |
| MD04G1196800 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT4G11420.1 | 1 | ATEIF3A-1;ATTIF3A1;EIF3A;EIF3A-1;TIF3A1|eukaryotic translation initiation factor 3A |
| Prunus persica | Prupe.6G317100.2.p | 1 | eukaryotic translation initiation factor 3A |
| Prunus persica | Prupe.6G317100.1.p | 1 | eukaryotic translation initiation factor 3A |
| Pyrus communis | PCP027384.1 | 1 | - |
| Pyrus communis | PCP025910.1 | 1 | - |
| Pyrus x bretschneideri | Pbr028946.1 | 1 | - |
| Rosa multiflora | Rmu_sc0005473.1_g000001.1 | 1 | - |
| Rubus occidentalis | Ro06_G23832 | 1 | - |
| Fragaria vesca | mrna31544.1 | 1 | eukaryotic translation initiation factor 3A |
| Vitis vinifera | GSVIVT01031192001 | 1 | eukaryotic translation initiation factor 3A |
| Solanum lycopersicum | Solyc09g010460.2.1 | 1 | eukaryotic translation initiation factor 3A |
| Populus trichocarpa | Potri.005G021400.1 | 1 | eukaryotic translation initiation factor 3A |
| Nicotiana benthamiana | Niben101Scf01841g01018.1 | 1 | Eukaryotic translation initiation factor 3 subunit A |
| Nicotiana benthamiana | Niben101Scf00713g00009.1 | 0.914 | Eukaryotic translation initiation factor 3 subunit A |
| Oryza sativa | LOC_Os01g03070.1 | 1 | "transposon protein, putative, unclassified, expressed" |
| Zea mays | GRMZM2G093050_P01 | 1 | protein_coding |
| GO term | Description | Category |
|---|---|---|
| GO:0005852 | eukaryotic translation initiation factor 3 complex | cellular component |
| GO:0005515 | protein binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| K03254 | translation initiation factor 3 subunit A | - |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
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