Gene detail

Detail information of MD05G1127200 Annotation

Gene ID	Annotation
MD05G1127200	mannosyltransferase family protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0098	proton-transporting V-type ATPase endoplasmic reticulum

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD05G1127200	mRNA	Chr05	25057176	25059692	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT50

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT5G22130.1	1	PNT1\|PEANUT 1
Arabidopsis thaliana	AT5G22130.2	0.962	PNT1\|PEANUT 1
Prunus persica	Prupe.8G170900.1.p	1	mannosyltransferase family protein
Pyrus communis	PCP045162.1	1	-
Pyrus x bretschneideri	Pbr039014.2	1	-
Rosa multiflora	Rmu_sc0014536.1_g000005.1	1	-
Rubus occidentalis	Ro02_G19289	1	-
Vitis vinifera	GSVIVT01017167001	1	mannosyltransferase family protein
Solanum lycopersicum	Solyc02g083260.2.1	1	mannosyltransferase family protein
Populus trichocarpa	Potri.001G031500.1	1	mannosyltransferase family protein
Nicotiana benthamiana	Niben101Scf01559g04004.1	1	GPI mannosyltransferase 1
Oryza sativa	LOC_Os03g46750.1	1	"GPI mannosyltransferase 1, putative, expressed"
Zea mays	GRMZM2G048762_P01	1	-

Gene Ontology

GO term	Description	Category
GO:0005789	endoplasmic reticulum membrane	cellular component
GO:0016021	integral component of membrane	cellular component
GO:0006506	GPI anchor biosynthetic process	biological_process

KEGG

KO	Description	Enzyme
K05284	"phosphatidylinositol glycan, class M"	EC:2.4.1.-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	3.23079
SRR5252888	dormant buds	no	dormant buds(0 month)	2.56285
SRR5252889	dormant buds	no	dormant buds(0 month)	3.09263
SRR5252886	dormant buds	no	dormant buds(1 months)	2.44169
SRR5252887	dormant buds	no	dormant buds(1 months)	3.46005
SRR5252884	dormant buds	no	dormant buds(2 months)	2.4175
SRR5252882	dormant buds	no	dormant buds(3 months)	4.73378
SRR5252883	dormant buds	no	dormant buds(3 months)	4.15177
SRR5252880	dormant buds	no	dormant buds(4 months)	3.68729
SRR5252881	dormant buds	no	dormant buds(4 months)	3.2614
SRR5252878	bud break	no	bud break	4.13173
SRR5252879	bud break	no	bud break	2.35446
SRR3744766	flower	no	mature	4.88248
SRR3744767	flower	no	mature	4.59053
SRR3744768	flower	no	mature	4.23288
SRR6308190	stigmas	no	open flowers	6.23051
SRR6308181	styles	no	open flowers	4.72734
SRR6308188	filaments	no	open flowers	2.84047
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	9.3994
SRR6308192	pollen	no	open flowers	34.037
SRR6308191	petals	no	open flowers	4.24766
SRR6308194	sepals	no	open flowers	3.92071
SRR6308193	receptacles	no	open flowers	4.45562
SRR6308189	ovaries	no	open flowers	4.89128
SRR3384922	fruit	no	1 week after full bloom	5.24239
SRR3384921	fruit	no	2 week after full bloom	4.32905
SRR3384920	fruit	no	3 week after full bloom	4.01785
SRR3384919	fruit	no	4 week after full bloom	5.47267
SRR3384923	fruit	no	5 week after full bloom	6.2001
SRR3384918	fruit	no	6 week after full bloom	5.8944
SRR3384917	fruit	no	8 week after full bloom	3.92769
SRR3384916	fruit	no	10 week after full bloom	4.72444
SRR3384915	fruit	no	12 week after full bloom	5.25451
SRR3384914	fruit	no	14 week after full bloom	5.20455
SRR3384913	fruit	no	16 week after full bloom	4.66142
SRR3384912	fruit	no	18 week after full bloom	4.01496
SRR3384911	fruit	no	19 week after full bloom	4.36809
SRR3384910	fruit	no	20 week after full bloom	3.5551
SRR768128	whole fruit	no	25 days post anthesis	3.25213
SRR768129	whole fruit	no	35 days post anthesis	5.28555
SRR768130	whole fruit	no	60 days post anthesis	2.99383
SRR768131	whole fruit	no	87 days post anthesis	3.78584
SRR7343308	immature fruit flesh	no	immature	3.51231
SRR7343309	immature fruit flesh	no	immature	7.6472
SRR6320494	ripe fruit flesh	no	mature	3.66432
SRR5405143	ripe fruit peel	no	mature	5.16973
SRR6320572	ripe fruit peel	no	mature	3.17658
SRR7403504	fruit	uninfected	mature	3.57069
SRR7403506	fruit	uninfected	mature	3.80361
SRR7403507	fruit	uninfected	mature	3.46237
SRR7403500	fruit	infected with penicillium expansum	mature	3.80002
SRR7403501	fruit	infected with penicillium expansum	mature	3.22237
SRR7403508	fruit	infected with penicillium expansum	mature	3.48447
SRR7403502	fruit	infected with penicillium expansum	mature	3.52786
SRR7403503	fruit	infected with penicillium expansum	mature	4.94333
SRR7403505	fruit	infected with penicillium expansum	mature	3.86388
SRR1613973	Central seeds	no	20DAPF	12.7876
SRR1613974	Central seeds	no	20DAPF	11.821
SRR1613975	Central seeds	no	20DAPF	10.634
SRR1613976	Lateral seeds	no	20DAPF	9.27917
SRR1613977	Lateral seeds	no	20DAPF	10.9233
SRR1613978	Lateral seeds	no	20DAPF	11.2843
SRR3744786	stem	no	mature	3.73026
SRR3744787	stem	no	mature	4.15808
SRR3744772	stem	no	mature	4.14718
SRX765691	seedling shoot apex	no	4-6 week old seedling	5.10596
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	5.99625
SRR1089478	leaf	Virus-free	plantlets	2.80439
SRR1089477	leaf	ASGV-infected	plantlets	4.2701
SRR767660	leaf	uninfected	fully developed	2.52846
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	3.96091
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	2.60404
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	3.50528
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	3.22391
SRR6308182	young leaf	no	immature leaves	5.12058
SRR3744769	leaf	no	mature	4.01527
SRR3744770	leaf	no	mature	4.20047
SRR3744771	leaf	no	mature	3.95261
SRR5405145	leaf	no	mature	3.88367
SRR6320561	leaf	no	mature	3.53823