Gene detail

Detail information of MD05G1345800 Annotation

Gene ID	Annotation
MD05G1345800	Peroxidase superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0405	cellular cation homeostasis divalent metal ion transport phosphatidylinositol 3-kinase complex

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD05G1345800	mRNA	Chr05	46533897	46536242	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT4G21960.1	1	PRXR1\|Peroxidase superfamily protein
Pyrus communis	PCP017906.1	1	-
Pyrus x bretschneideri	Pbr000146.1	1	-
Rosa multiflora	Rmu_sc0000146.1_g000034.1	1	-
Rubus occidentalis	Ro03_G10600	1	-
Solanum lycopersicum	Solyc02g080530.2.1	1	Peroxidase superfamily protein
Solanum lycopersicum	Solyc09g007520.2.1	1	Peroxidase superfamily protein
Populus trichocarpa	Potri.004G015300.1	1	Peroxidase superfamily protein
Nicotiana benthamiana	Niben101Scf03507g05007.1	1	Peroxidase 42
Nicotiana benthamiana	Niben101Scf08338g00001.1	0.89	Peroxidase 42

Gene Ontology

GO term	Description	Category
GO:0020037	heme binding	molecular_function
GO:0055114	oxidation-reduction process	biological_process
GO:0006979	response to oxidative stress	biological_process
GO:0004601	peroxidase activity	molecular_function

KEGG

KO	Description	Enzyme
K00430	peroxidase	EC:1.11.1.7

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	799.315
SRR5252888	dormant buds	no	dormant buds(0 month)	431.673
SRR5252889	dormant buds	no	dormant buds(0 month)	470.702
SRR5252886	dormant buds	no	dormant buds(1 months)	145.442
SRR5252887	dormant buds	no	dormant buds(1 months)	117.298
SRR5252884	dormant buds	no	dormant buds(2 months)	62.9975
SRR5252882	dormant buds	no	dormant buds(3 months)	43.2373
SRR5252883	dormant buds	no	dormant buds(3 months)	33.583
SRR5252880	dormant buds	no	dormant buds(4 months)	76.7987
SRR5252881	dormant buds	no	dormant buds(4 months)	95.0792
SRR5252878	bud break	no	bud break	304.568
SRR5252879	bud break	no	bud break	259.86
SRR3744766	flower	no	mature	25.2499
SRR3744767	flower	no	mature	24.2153
SRR3744768	flower	no	mature	27.8318
SRR6308190	stigmas	no	open flowers	29.0437
SRR6308181	styles	no	open flowers	25.4918
SRR6308188	filaments	no	open flowers	47.6642
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	1.49298
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	98.97
SRR6308194	sepals	no	open flowers	2.94311
SRR6308193	receptacles	no	open flowers	2.95554
SRR6308189	ovaries	no	open flowers	13.8437
SRR3384922	fruit	no	1 week after full bloom	59.5141
SRR3384921	fruit	no	2 week after full bloom	27.646
SRR3384920	fruit	no	3 week after full bloom	13.7215
SRR3384919	fruit	no	4 week after full bloom	12.7827
SRR3384923	fruit	no	5 week after full bloom	14.4766
SRR3384918	fruit	no	6 week after full bloom	23.1343
SRR3384917	fruit	no	8 week after full bloom	12.9709
SRR3384916	fruit	no	10 week after full bloom	13.2169
SRR3384915	fruit	no	12 week after full bloom	6.41722
SRR3384914	fruit	no	14 week after full bloom	1.75233
SRR3384913	fruit	no	16 week after full bloom	0.0711707
SRR3384912	fruit	no	18 week after full bloom	0.73469
SRR3384911	fruit	no	19 week after full bloom	0.128119
SRR3384910	fruit	no	20 week after full bloom	0.100314
SRR768128	whole fruit	no	25 days post anthesis	64.0521
SRR768129	whole fruit	no	35 days post anthesis	26.019
SRR768130	whole fruit	no	60 days post anthesis	71.238
SRR768131	whole fruit	no	87 days post anthesis	21.1875
SRR7343308	immature fruit flesh	no	immature	12.4583
SRR7343309	immature fruit flesh	no	immature	9.23674
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.100293
SRR7403506	fruit	uninfected	mature	0.0706302
SRR7403507	fruit	uninfected	mature	0.209654
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	19.6096
SRR1613974	Central seeds	no	20DAPF	18.1604
SRR1613975	Central seeds	no	20DAPF	17.5035
SRR1613976	Lateral seeds	no	20DAPF	24.2079
SRR1613977	Lateral seeds	no	20DAPF	25.872
SRR1613978	Lateral seeds	no	20DAPF	24.35
SRR3744786	stem	no	mature	10.753
SRR3744787	stem	no	mature	11.2175
SRR3744772	stem	no	mature	9.95407
SRX765691	seedling shoot apex	no	4-6 week old seedling	858.443
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	483.362
SRR1089478	leaf	Virus-free	plantlets	843.539
SRR1089477	leaf	ASGV-infected	plantlets	634.855
SRR767660	leaf	uninfected	fully developed	2187.84
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	2186.91
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	2180.99
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	1806.39
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	540.039
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	421.074
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	444.864
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	798.13
SRR6308182	young leaf	no	immature leaves	313.822
SRR3744769	leaf	no	mature	42.6296
SRR3744770	leaf	no	mature	43.3366
SRR3744771	leaf	no	mature	41.6958
SRR5405145	leaf	no	mature	432.5
SRR6320561	leaf	no	mature	306.35