Gene ID | Annotation |
---|---|
MD05G1350700 | Predicted pyridoxal phosphate-dependent enzyme |
Network Category | Global Network | Conditional network (different tissues and developmental stages) |
---|---|---|
Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
Method | Module ID | Function Annotation |
---|---|---|
Co-expression network | CFinderM0819 | protein targeting to vacuole Golgi stack endosomal transport phosphatidylinositol binding cell morphogenesis intra-Golgi vesicle-mediated transport protein transporter activity cell growth protein N-linked glycosylation metal ion binding EREBP-like factor negative regulation of ethylene-activated signaling pathway |
more details in UCSC | details of chromatin state |
Gene | Type | Chr | Start | End | Strand |
---|---|---|---|---|---|
MD05G1350700 | mRNA | Chr05 | 46804707 | 46806786 | + |
CDS: |
MD05G1350700 |
Protein: |
MD05G1350700 |
Gene family | Subfamily |
---|---|
-- | -- |
Species | Gene ID | Score of Inparanoid | Annotation |
---|---|---|---|
Arabidopsis thaliana | AT1G11930.2 | 1 | "Predicted pyridoxal phosphate-dependent enzyme, YBL036C type" |
Arabidopsis thaliana | AT1G11930.1 | 0.953 | "Predicted pyridoxal phosphate-dependent enzyme, YBL036C type" |
Prunus persica | Prupe.4G016700.1.p | 1 | "Predicted pyridoxal phosphate-dependent enzyme, YBL036C type" |
Pyrus communis | PCP044113.1 | 1 | - |
Pyrus x bretschneideri | Pbr000114.1 | 1 | - |
Rosa multiflora | Rmu_sc0001717.1_g000005.1 | 1 | - |
Rubus occidentalis | Ro03_G33168 | 1 | - |
Fragaria vesca | mrna19486.1 | 1 | "Predicted pyridoxal phosphate-dependent enzyme, YBL036C type" |
Vitis vinifera | GSVIVT01012671001 | 1 | "Predicted pyridoxal phosphate-dependent enzyme, YBL036C type" |
Solanum lycopersicum | Solyc02g080940.2.1 | 1 | "Predicted pyridoxal phosphate-dependent enzyme, YBL036C type" |
Populus trichocarpa | Potri.004G006600.1 | 1 | "Predicted pyridoxal phosphate-dependent enzyme, YBL036C type" |
Nicotiana benthamiana | Niben101Scf32850g00013.1 | 1 | Proline synthase co-transcribed bacterial homolog protein |
Nicotiana benthamiana | Niben101Scf02145g07008.1 | 0.862 | Proline synthase co-transcribed bacterial homolog protein |
Oryza sativa | LOC_Os05g05740.1 | 1 | "proline synthetase co-transcribed bacterial homolog protein, putative, expressed" |
Zea mays | GRMZM2G381129_P01 | 1 | - |
GO term | Description | Category |
---|---|---|
-- | -- | -- |
KO | Description | Enzyme |
---|---|---|
-- | -- | -- |
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
PF01168.16 | Ala_racemase_N | 83 | 302 | 4.20E-21 |