Detail information of MD06G1038300 Annotation
Gene IDAnnotation
MD06G1038300Syntaxin/t-SNARE family protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0049mitochondrial inner membrane
mitochondrial respiratory chain complex III
tricarboxylic acid cycle
intracellular signal transduction
mitochondrial transport
Golgi apparatus
protein targeting to vacuole
response to chitin

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD06G1038300mRNAChr0649015894905555-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT5G46860.11ATSYP22;ATVAM3;SGR3;SYP22;VAM3|ARABIDOPSIS THALIANA SYNTAXIN OF PLANTS 22;ARABIDOPSIS THALIANA VACUOLAR MORPHOLOGY 3;SHOOT GRAVITROPISM 3;SYNTAXIN OF PLANTS 22;VACUOLAR MORPHOLOGY 3
Prunus persicaPrupe.5G030000.1.p1Syntaxin/t-SNARE family protein
Prunus persicaPrupe.5G030000.2.p0.879Syntaxin/t-SNARE family protein
Pyrus x bretschneideriPbr013850.11-
Rosa multifloraRmu_sc0011240.1_g000011.11-
Rosa multifloraRmu_sc0012097.1_g000010.11-
Rubus occidentalisRo05_G138411-
Fragaria vescamrna13765.11Syntaxin/t-SNARE family protein
Vitis viniferaGSVIVT010131000011Syntaxin/t-SNARE family protein
Solanum lycopersicumSolyc08g076540.2.11Syntaxin/t-SNARE family protein
Solanum lycopersicumSolyc01g100170.2.11syntaxin of plants 43
Solanum lycopersicumSolyc08g067910.2.11syntaxin of plants 32
Populus trichocarpaPotri.003G095300.11Syntaxin/t-SNARE family protein
Nicotiana benthamianaNiben101Scf15227g00027.11Syntaxin-22
Nicotiana benthamianaNiben101Scf07030g00014.10.795Syntaxin-22
Oryza sativaLOC_Os06g11930.11"SNARE domain containing protein, putative"
Oryza sativaLOC_Os01g15110.11"syntaxin, putative, expressed"
Zea maysGRMZM2G017329_P011Syntaxin 23;

Gene Ontology
GO termDescriptionCategory
GO:0005484SNAP receptor activitymolecular_function
GO:0006886intracellular protein transportbiological_process
GO:0016020membranecellular component
GO:0016192vesicle-mediated transportbiological_process

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF14523.2Syntaxin_2311318.40E-36


Expression pattern
TOP