Gene ID | Annotation |
---|---|
MD06G1073700 | GPI transamidase subunit PIG-U |
Network Category | Global Network | Conditional network (different tissues and developmental stages) |
---|---|---|
Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
Method | Module ID | Function Annotation |
---|---|---|
Co-expression network | CFinderM0713 | GPI anchor biosynthetic process D-xylose metabolic process pre-mRNA-splicing factor 18 dolichyl-diphosphooligosaccharide-protein glycotransferase activity endoplasmic reticulum membrane integral component of membrane RNA splicing |
more details in UCSC | details of chromatin state |
Gene | Type | Chr | Start | End | Strand |
---|---|---|---|---|---|
MD06G1073700 | mRNA | Chr06 | 18312969 | 18319716 | + |
CDS: |
MD06G1073700 |
Protein: |
MD06G1073700 |
Gene family | Subfamily |
---|---|
-- | -- |
Species | Gene ID | Score of Inparanoid | Annotation |
---|---|---|---|
Arabidopsis thaliana | AT1G63110.1 | 1 | GPI transamidase subunit PIG-U |
Prunus persica | Prupe.5G091900.1.p | 1 | GPI transamidase subunit PIG-U |
Pyrus communis | PCP006183.1 | 1 | - |
Pyrus x bretschneideri | Pbr037216.1 | 1 | - |
Rosa multiflora | Rmu_sc0006266.1_g000049.1 | 1 | - |
Rubus occidentalis | Ro05_G30786 | 1 | - |
Fragaria vesca | mrna32392.1 | 1 | GPI transamidase subunit PIG-U |
Vitis vinifera | GSVIVT01019817001 | 1 | GPI transamidase subunit PIG-U |
Populus trichocarpa | Potri.001G109200.1 | 1 | GPI transamidase subunit PIG-U |
Nicotiana benthamiana | Niben101Scf00741g00001.1 | 1 | GPI transamidase subunit PIG-U LENGTH=469 |
Oryza sativa | LOC_Os02g46350.2 | 1 | "GPI transamidase subunit PIG-U domain containing protein,expressed" |
Zea mays | GRMZM5G891295_P01 | 1 | GPI transamidase subunit PIG-U family protein; |
GO term | Description | Category |
---|---|---|
GO:0005789 | endoplasmic reticulum membrane | cellular component |
GO:0016021 | integral component of membrane | cellular component |
GO:0006506 | GPI anchor biosynthetic process | biological_process |
KO | Description | Enzyme |
---|---|---|
-- | -- | -- |
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
-- | -- | -- | -- | -- |