Detail information of MD06G1077900 Annotation
Gene IDAnnotation
MD06G1077900Nucleic acid-binding

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0638ncRNA metabolic process
RNA binding
chloroplast relocation
phosphatidylglycerol biosynthetic process
carotenoid biosynthetic process
chloroplast
Group II intron splicing
thylakoid membrane organization
suspensor development
isopentenyl diphosphate biosynthetic process
damaged DNA binding

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD06G1077900mRNAChr061928320619289381-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT1G12800.11"Nucleic acid-binding, OB-fold-like protein"
Prunus persicaPrupe.5G095700.2.p1"Nucleic acid-binding, OB-fold-like protein"
Prunus persicaPrupe.5G095700.1.p0.87"Nucleic acid-binding, OB-fold-like protein"
Pyrus communisPCP018449.11-
Pyrus x bretschneideriPbr007538.11-
Pyrus x bretschneideriPbr011037.11-
Rosa multifloraRmu_sc0001250.1_g000003.11-
Rubus occidentalisRo05_G110631-
Fragaria vescamrna32437.11"Nucleic acid-binding, OB-fold-like protein"
Vitis viniferaGSVIVT010198060011"Nucleic acid-binding, OB-fold-like protein"
Solanum lycopersicumSolyc08g007950.2.11"Nucleic acid-binding, OB-fold-like protein"
Populus trichocarpaPotri.003G124200.11"Nucleic acid-binding, OB-fold-like protein"
Nicotiana benthamianaNiben101Scf04315g01006.11"Nucleic acid-binding, OB-fold-like protein LENGTH=767"
Nicotiana benthamianaNiben101Scf01111g05017.10.61"Nucleic acid-binding, OB-fold-like protein LENGTH=767"
Oryza sativaLOC_Os02g02390.11"S1 RNA binding domain containing protein, expressed"
Zea maysGRMZM2G088114_P011"Nucleic acid-binding, OB-fold-like protein "

Gene Ontology
GO termDescriptionCategory
GO:0003723RNA bindingmolecular_function

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00575.19S15876591.10E-11


Expression pattern
TOP