| Gene ID | Annotation |
|---|---|
| MD07G1096800 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0235 | histone methyltransferase activity (H3-K4 specific) RNA binding |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD07G1096800 | mRNA | Chr07 | 10629598 | 10636074 | + |
| CDS: |
| MD07G1096800 |
| Protein: |
| MD07G1096800 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Prunus persica | Prupe.2G120600.4.p | 1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Prunus persica | Prupe.2G120600.3.p | 1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Prunus persica | Prupe.2G120600.2.p | 1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Prunus persica | Prupe.2G120600.1.p | 0.715 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Pyrus communis | PCP015182.1 | 1 | - |
| Pyrus x bretschneideri | Pbr018425.1 | 1 | - |
| Rosa multiflora | Rmu_sc0002329.1_g000009.1 | 1 | - |
| Rubus occidentalis | Ro07_G16756 | 1 | - |
| Fragaria vesca | mrna05323.1 | 1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Vitis vinifera | GSVIVT01018314001 | 1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Populus trichocarpa | Potri.014G051500.3 | 1 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| Nicotiana benthamiana | Niben101Scf02471g05010.1 | 1 | RNA-binding protein 4.1 |
| Oryza sativa | LOC_Os04g45930.2 | 1 | "RNA recognition motif containing protein, expressed" |
| Oryza sativa | LOC_Os07g08320.1 | 1 | "RNA recognition motif containing protein, expressed" |
| Zea mays | GRMZM2G019919_P01 | 1 | Water-stress protein |
| GO term | Description | Category |
|---|---|---|
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00076.18 | RRM_1 | 229 | 297 | 5.00E-18 |
| PF00076.18 | RRM_1 | 309 | 375 | 1.40E-07 |
| PF00076.18 | RRM_1 | 406 | 471 | 2.10E-11 |
 |