Gene ID | Annotation |
---|---|
MD09G1077600 | ARM repeat superfamily protein |
Network Category | Global Network | Conditional network (different tissues and developmental stages) |
---|---|---|
Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
Method | Module ID | Function Annotation |
---|---|---|
Co-expression network | CFinderM0586 | DnaJ homolog subfamily C member 13 regulatory region DNA binding 1-phosphatidylinositol-3-kinase activity serine/threonine-protein kinase mTOR [EC:2.7.11.1] rRNA transcription amyloplast organization nuclear-transcribed mRNA catabolic process positive regulation of cell growth positive regulation of rRNA processing positive regulation of embryonic development endosome organization negative regulation of autophagy regulator of nonsense transcripts 1 [EC:3.6.4.-] response to starvation RNA helicase activity negative gravitropism nucleus cytoplasmic mRNA processing body late endosome vegetative to reproductive phase transition of meristem protein ubiquitination involved in ubiquitin-dependent protein catabolic process zinc ion binding protein self-association endocytosis hormone-mediated signaling pathway vacuolar protein sorting-associated protein 8 trichome branching seed maturation 20S proteasome subunit beta 4 [EC:3.4.25.1] E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] E3 ubiquitin-protein ligase BRE1 [EC:2.3.2.27] |
more details in UCSC | details of chromatin state |
Gene | Type | Chr | Start | End | Strand |
---|---|---|---|---|---|
MD09G1077600 | mRNA | Chr09 | 5458767 | 5471960 | - |
CDS: |
MD09G1077600 |
Protein: |
MD09G1077600 |
Gene family | Subfamily |
---|---|
-- | -- |
Species | Gene ID | Score of Inparanoid | Annotation |
---|---|---|---|
Arabidopsis thaliana | AT5G15680.1 | 1 | ARM repeat superfamily protein |
Prunus persica | Prupe.3G246500.1.p | 1 | ARM repeat superfamily protein |
Pyrus communis | PCP011570.1 | 1 | - |
Pyrus x bretschneideri | Pbr022215.1 | 1 | - |
Rosa multiflora | Rmu_co8522507.1_g000001.1 | 1 | - |
Rubus occidentalis | Ro06_G04863 | 1 | - |
Fragaria vesca | mrna04192.1 | 1 | ARM repeat superfamily protein |
Vitis vinifera | GSVIVT01036514001 | 1 | ARM repeat superfamily protein |
Solanum lycopersicum | Solyc03g046450.2.1 | 1 | ARM repeat superfamily protein |
Populus trichocarpa | Potri.017G106100.1 | 1 | ARM repeat superfamily protein |
Nicotiana benthamiana | Niben101Scf09803g00013.1 | 1 | Protein furry homolog-like |
Oryza sativa | LOC_Os02g58410.1 | 1 | expressed protein |
Zea mays | GRMZM2G344967_P01 | 1 | - |
GO term | Description | Category |
---|---|---|
GO:0005488 | binding | molecular_function |
KO | Description | Enzyme |
---|---|---|
-- | -- | -- |
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
-- | -- | -- | -- | -- |