Detail information of MD10G1145000 Annotation
Gene IDAnnotation
MD10G1145000Clathrin adaptor complex small chain family protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0098proton-transporting V-type ATPase
endoplasmic reticulum

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD10G1145000mRNAChr102313715523139150+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT2G17380.11AP19|associated protein 19
Arabidopsis thalianaAT4G35410.21Clathrin adaptor complex small chain family protein
Pyrus communisPCP032853.11-
Pyrus x bretschneideriPbr035544.11-
Rosa multifloraRmu_ssc0000126.1_g000072.11-
Rubus occidentalisRo02_G151381-
Fragaria vescamrna17124.11Clathrin adaptor complex small chain family protein
Vitis viniferaGSVIVT010289120011Clathrin adaptor complex small chain family protein
Solanum lycopersicumSolyc11g005220.1.11Clathrin adaptor complex small chain family protein
Solanum lycopersicumSolyc04g081410.2.11SNARE-like superfamily protein
Solanum lycopersicumSolyc02g085240.2.11Clathrin adaptor complex small chain family protein
Populus trichocarpaPotri.012G050400.11Clathrin adaptor complex small chain family protein
Populus trichocarpaPotri.012G052000.11Clathrin adaptor complex small chain family protein
Nicotiana benthamianaNiben101Scf05217g03003.11AP-1 complex subunit sigma-1
Oryza sativaLOC_Os03g57040.21"clathrin adaptor complex small chain domain containing protein, expressed"
Zea maysGRMZM2G361220_P011-

Gene Ontology
GO termDescriptionCategory
GO:0006886intracellular protein transportbiological_process
GO:0030117membrane coatcellular component
GO:0008565protein transporter activitymolecular_function
GO:0016192vesicle-mediated transportbiological_process

KEGG
KODescriptionEnzyme
K12394AP-1 complex subunit sigma 1/2-

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF01217.16Clat_adaptor_s11408.70E-55


Expression pattern
TOP