Gene detail

Detail information of MD10G1212200 Annotation

Gene ID	Annotation
MD10G1212200	Uncharacterized conserved protein (DUF2358)

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0233	mitotic spindle positive regulation of microtubule polymerization microtubule bundle formation cortical microtubule anaphase preprophase band microtubule nucleation spindle cortical microtubule organization cytokinesis post-embryonic root development cycloartenol synthase [EC:5.4.99.8] phragmoplast starch metabolic process polysaccharide catabolic process regulation of cell division microtubule binding enhancer sequence-specific DNA binding

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD10G1212200	mRNA	Chr10	31093333	31095412	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT1G79510.2	1	Uncharacterized conserved protein (DUF2358)
Arabidopsis thaliana	AT1G79510.1	1	Uncharacterized conserved protein (DUF2358)
Prunus persica	Prupe.4G130800.1.p	1	Uncharacterized conserved protein (DUF2358)
Pyrus communis	PCP023604.1	1	-
Pyrus x bretschneideri	Pbr004470.1	1	-
Rosa multiflora	Rmu_sc0004175.1_g000013.1	1	-
Fragaria vesca	mrna18484.1	1	Uncharacterized conserved protein (DUF2358)
Vitis vinifera	GSVIVT01036740001	1	Uncharacterized conserved protein (DUF2358)
Populus trichocarpa	Potri.010G173000.1	1	Uncharacterized conserved protein (DUF2358)
Oryza sativa	LOC_Os04g52330.1	1	expressed protein
Zea mays	GRMZM2G045581_P01	1	-
Zea mays	GRMZM2G022926_P01	0.852	-

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	4.01864
SRR5252888	dormant buds	no	dormant buds(0 month)	4.73076
SRR5252889	dormant buds	no	dormant buds(0 month)	4.72442
SRR5252886	dormant buds	no	dormant buds(1 months)	7.5982
SRR5252887	dormant buds	no	dormant buds(1 months)	6.60714
SRR5252884	dormant buds	no	dormant buds(2 months)	6.21372
SRR5252882	dormant buds	no	dormant buds(3 months)	7.05513
SRR5252883	dormant buds	no	dormant buds(3 months)	8.07215
SRR5252880	dormant buds	no	dormant buds(4 months)	3.63788
SRR5252881	dormant buds	no	dormant buds(4 months)	3.64714
SRR5252878	bud break	no	bud break	4.44164
SRR5252879	bud break	no	bud break	1.94419
SRR3744766	flower	no	mature	37.6774
SRR3744767	flower	no	mature	37.893
SRR3744768	flower	no	mature	36.9819
SRR6308190	stigmas	no	open flowers	15.6714
SRR6308181	styles	no	open flowers	14.1971
SRR6308188	filaments	no	open flowers	13.4958
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	27.3397
SRR6308192	pollen	no	open flowers	47.3857
SRR6308191	petals	no	open flowers	14.0027
SRR6308194	sepals	no	open flowers	25.7454
SRR6308193	receptacles	no	open flowers	14.5632
SRR6308189	ovaries	no	open flowers	12.0284
SRR3384922	fruit	no	1 week after full bloom	6.99025
SRR3384921	fruit	no	2 week after full bloom	4.94504
SRR3384920	fruit	no	3 week after full bloom	2.93777
SRR3384919	fruit	no	4 week after full bloom	3.58645
SRR3384923	fruit	no	5 week after full bloom	3.13414
SRR3384918	fruit	no	6 week after full bloom	3.59156
SRR3384917	fruit	no	8 week after full bloom	4.96306
SRR3384916	fruit	no	10 week after full bloom	3.5124
SRR3384915	fruit	no	12 week after full bloom	3.24497
SRR3384914	fruit	no	14 week after full bloom	5.30047
SRR3384913	fruit	no	16 week after full bloom	6.63326
SRR3384912	fruit	no	18 week after full bloom	5.61468
SRR3384911	fruit	no	19 week after full bloom	9.13133
SRR3384910	fruit	no	20 week after full bloom	6.82876
SRR768128	whole fruit	no	25 days post anthesis	3.44427
SRR768129	whole fruit	no	35 days post anthesis	4.72789
SRR768130	whole fruit	no	60 days post anthesis	4.63411
SRR768131	whole fruit	no	87 days post anthesis	4.31427
SRR7343308	immature fruit flesh	no	immature	3.57716
SRR7343309	immature fruit flesh	no	immature	3.89428
SRR6320494	ripe fruit flesh	no	mature	18.6561
SRR5405143	ripe fruit peel	no	mature	6.53681
SRR6320572	ripe fruit peel	no	mature	3.50331
SRR7403504	fruit	uninfected	mature	15.7063
SRR7403506	fruit	uninfected	mature	16.6882
SRR7403507	fruit	uninfected	mature	14.3722
SRR7403500	fruit	infected with penicillium expansum	mature	40.1988
SRR7403501	fruit	infected with penicillium expansum	mature	38.324
SRR7403508	fruit	infected with penicillium expansum	mature	39.8782
SRR7403502	fruit	infected with penicillium expansum	mature	42.8507
SRR7403503	fruit	infected with penicillium expansum	mature	43.3374
SRR7403505	fruit	infected with penicillium expansum	mature	41.2504
SRR1613973	Central seeds	no	20DAPF	6.32192
SRR1613974	Central seeds	no	20DAPF	5.35863
SRR1613975	Central seeds	no	20DAPF	5.0237
SRR1613976	Lateral seeds	no	20DAPF	7.99891
SRR1613977	Lateral seeds	no	20DAPF	7.74879
SRR1613978	Lateral seeds	no	20DAPF	8.58583
SRR3744786	stem	no	mature	6.91693
SRR3744787	stem	no	mature	6.76833
SRR3744772	stem	no	mature	6.00052
SRX765691	seedling shoot apex	no	4-6 week old seedling	1.80516
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	2.1129
SRR1089478	leaf	Virus-free	plantlets	7.93242
SRR1089477	leaf	ASGV-infected	plantlets	10.0911
SRR767660	leaf	uninfected	fully developed	19.9535
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	5.73974
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	10.7018
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	9.70088
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	49.6886
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	21.9084
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	18.1682
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	14.0887
SRR6308182	young leaf	no	immature leaves	6.48282
SRR3744769	leaf	no	mature	18.0711
SRR3744770	leaf	no	mature	17.256
SRR3744771	leaf	no	mature	16.8354
SRR5405145	leaf	no	mature	20.3401
SRR6320561	leaf	no	mature	19.8138