| Gene ID | Annotation |
|---|---|
| MD10G1319100 | Ubiquitin-like superfamily protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0210 | protein phosphatase inhibitor 2 syntaxin 6 E3 ubiquitin-protein ligase makorin [EC:2.3.2.27] protein phosphatase inhibitor activity calcium:cation antiporter activity Atg8-specific protease activity Atg8 ligase activity Atg8 activating enzyme activity regulation of protein serine/threonine phosphatase activity regulation of phosphoprotein phosphatase activity vacuolar lumen trans-Golgi network transport vesicle autophagosome |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD10G1319100 | mRNA | Chr10 | 40139268 | 40142698 | - |
| CDS: |
| MD10G1319100 |
| Protein: |
| MD10G1319100 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Pyrus communis | PCP016494.1 | 1 | - |
| GO term | Description | Category |
|---|---|---|
| GO:0032258 | CVT pathway | biological_process |
| GO:0006914 | autophagy | biological_process |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02991.12 | Atg8 | 87 | 187 | 1.90E-14 |
| PF02991.12 | Atg8 | 235 | 331 | 6.20E-16 |
 |