Detail information of MD11G1213200 Annotation
Gene IDAnnotation
MD11G1213200SWAP (Suppressor-of-White-APricot)/surp domain-containing protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0367ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]
GT64
regulation of proteolysis
negative regulation of endopeptidase activity
ATP-dependent helicase activity
cysteine-type endopeptidase inhibitor activity
serine-type endopeptidase inhibitor activity
nucleic acid binding

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD11G1213200mRNAChr113117455531177024+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT5G55100.11SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Arabidopsis thalianaAT5G55100.21SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Prunus persicaPrupe.4G218000.2.p1SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Prunus persicaPrupe.4G218000.3.p1SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Prunus persicaPrupe.4G218000.4.p1SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Prunus persicaPrupe.4G218000.5.p1SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Prunus persicaPrupe.4G218000.1.p1SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Pyrus communisPCP016990.11-
Pyrus x bretschneideriPbr027794.11-
Rubus occidentalisRo03_G172011-
Fragaria vescamrna03412.11SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Vitis viniferaGSVIVT010376870011SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Solanum lycopersicumSolyc10g006260.2.11SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Populus trichocarpaPotri.001G356800.11SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
Nicotiana benthamianaNiben101Scf03597g00015.11"Splicing factor, suppressor of white-apricot homolog"
Nicotiana benthamianaNiben101Scf01752g02011.10.799"Splicing factor, suppressor of white-apricot homolog"
Oryza sativaLOC_Os01g50320.11"surp module family protein, putative, expressed"
Zea maysGRMZM2G126691_P011-

Gene Ontology
GO termDescriptionCategory
GO:0003723RNA bindingmolecular_function
GO:0006396RNA processingbiological_process

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern
TOP