Gene ID | Annotation |
---|---|
MD11G1315200 | MUTS homolog 6 |
Network Category | Global Network | Conditional network (different tissues and developmental stages) |
---|---|---|
Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
Method | Module ID | Function Annotation |
---|---|---|
Co-expression network | CFinderM0040 | MutSalpha complex nuclear chromosome guanine/thymine mispair binding single base insertion or deletion binding four-way junction DNA binding pyrimidine dimer repair negative regulation of DNA recombination meiotic mismatch repair maintenance of DNA repeat elements |
more details in UCSC | details of chromatin state |
Gene | Type | Chr | Start | End | Strand |
---|---|---|---|---|---|
MD11G1315200 | mRNA | Chr11 | 42738149 | 42740318 | + |
CDS: |
MD11G1315200 |
Protein: |
MD11G1315200 |
Gene family | Subfamily |
---|---|
-- | -- |
Species | Gene ID | Score of Inparanoid | Annotation |
---|---|---|---|
-- | -- | -- | -- |
GO term | Description | Category |
---|---|---|
GO:0006298 | mismatch repair | biological_process |
GO:0030983 | mismatched DNA binding | molecular_function |
GO:0005524 | ATP binding | molecular_function |
KO | Description | Enzyme |
---|---|---|
-- | -- | -- |
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
PF01624.16 | MutS_I | 19 | 132 | 3.20E-17 |
PF05188.13 | MutS_II | 142 | 222 | 1.50E-07 |