| Gene ID | Annotation |
|---|---|
| MD13G1031100 | Endosomal targeting BRO1-like domain-containing protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0814 | programmed cell death 6-interacting protein ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13] AP-2 complex subunit alpha RNA-dependent ATPase activity Ras-related protein Rab-2A |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD13G1031100 | mRNA | Chr13 | 2233717 | 2239986 | - |
| CDS: |
| MD13G1031100 |
| Protein: |
| MD13G1031100 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT1G15130.1 | 1 | Endosomal targeting BRO1-like domain-containing protein |
| Pyrus communis | PCP005430.1 | 1 | - |
| Pyrus x bretschneideri | Pbr028748.1 | 1 | - |
| Rosa multiflora | Rmu_ssc0000164.1_g000001.1 | 1 | - |
| Fragaria vesca | mrna03621.1 | 1 | Endosomal targeting BRO1-like domain-containing protein |
| Vitis vinifera | GSVIVT01011794001 | 1 | Endosomal targeting BRO1-like domain-containing protein |
| Solanum lycopersicum | Solyc05g008430.2.1 | 1 | Endosomal targeting BRO1-like domain-containing protein |
| Populus trichocarpa | Potri.008G126900.1 | 1 | Endosomal targeting BRO1-like domain-containing protein |
| Nicotiana benthamiana | Niben101Scf04973g02006.1 | 1 | Vacuolar protein-sorting protein bro1 |
| Nicotiana benthamiana | Niben101Scf04109g03009.1 | 0.839 | Vacuolar protein-sorting protein bro1 |
| Oryza sativa | LOC_Os10g35250.1 | 1 | "vacuolar protein-sorting protein bro1, putative, expressed" |
| Zea mays | GRMZM2G082529_P01 | 1 | - |
| Zea mays | GRMZM2G168855_P01 | 0.803 | ALG2-interacting protein X |
| GO term | Description | Category |
|---|---|---|
| GO:0005515 | protein binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| K12200 | programmed cell death 6-interacting protein | - |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03097.14 | BRO1 | 13 | 392 | 5.90E-106 |
| PF13949.2 | ALIX_LYPXL_bnd | 427 | 712 | 3.50E-72 |
 |