Detail information of MD13G1063400 Annotation
Gene IDAnnotation
MD13G1063400Tetratricopeptide repeat (TPR)-like superfamily protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0689translation initiation factor 5
histidinol-phosphate aminotransferase [EC:2.6.1.9]
pyridoxine kinase [EC:2.7.1.35]
GT32
histidinol-phosphate transaminase activity
pyridoxal kinase activity
pyridoxal 5'-phosphate salvage

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD13G1063400mRNAChr1343900644393421+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT1G26460.11Tetratricopeptide repeat (TPR)-like superfamily protein
Prunus persicaPrupe.1G286100.1.p1Tetratricopeptide repeat (TPR)-like superfamily protein
Pyrus communisPCP013082.11-
Pyrus communisPCP025981.11-
Pyrus x bretschneideriPbr029961.11-
Rosa multifloraRmu_sc0004398.1_g000003.11-
Rosa multifloraRmu_sc0002327.1_g000019.11-
Rubus occidentalisRo04_G361871-
Vitis viniferaGSVIVT010122110011Tetratricopeptide repeat (TPR)-like superfamily protein
Solanum lycopersicumSolyc05g012390.2.11Tetratricopeptide repeat (TPR)-like superfamily protein
Populus trichocarpaPotri.010G159100.11Tetratricopeptide repeat (TPR)-like superfamily protein
Nicotiana benthamianaNiben101Scf03027g01002.11Pentatricopeptide repeat-containing protein
Nicotiana benthamianaNiben101Scf00635g08008.10.933Pentatricopeptide repeat-containing protein
Oryza sativaLOC_Os07g40800.11"PPR repeat domain containing protein, putative, expressed"
Zea maysGRMZM2G044023_P011-

Gene Ontology
GO termDescriptionCategory
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KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern
TOP