| Gene ID | Annotation |
|---|---|
| MD13G1106100 | TCP-1/cpn60 chaperonin family protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0927 | pre-mRNA 3'-end-processing factor FIP1 flap endonuclease-1 [EC:3.-.-.-] T-complex protein 1 subunit epsilon 5'-3' exonuclease activity nucleolus |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD13G1106100 | mRNA | Chr13 | 7615397 | 7619209 | + |
| CDS: |
| MD13G1106100 |
| Protein: |
| MD13G1106100 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT1G24510.1 | 1 | TCP-1/cpn60 chaperonin family protein |
| Prunus persica | Prupe.1G240000.1.p | 1 | TCP-1/cpn60 chaperonin family protein |
| Pyrus communis | PCP024218.1 | 1 | - |
| Rosa multiflora | Rmu_sc0001084.1_g000043.1 | 1 | - |
| Rubus occidentalis | Ro04_G36263 | 1 | - |
| Fragaria vesca | mrna11035.1 | 1 | TCP-1/cpn60 chaperonin family protein |
| Vitis vinifera | GSVIVT01020856001 | 1 | TCP-1/cpn60 chaperonin family protein |
| Solanum lycopersicum | Solyc05g013990.2.1 | 1 | TCP-1/cpn60 chaperonin family protein |
| Populus trichocarpa | Potri.010G051700.1 | 1 | TCP-1/cpn60 chaperonin family protein |
| Populus trichocarpa | Potri.008G182300.1 | 0.679 | TCP-1/cpn60 chaperonin family protein |
| Nicotiana benthamiana | Niben101Scf12680g01003.1 | 1 | T-complex protein 1 subunit eta |
| Oryza sativa | LOC_Os06g36700.1 | 1 | "T-complex protein, putative, expressed" |
| Zea mays | GRMZM2G043383_P01 | 1 | - |
| Zea mays | GRMZM2G070542_P01 | 0.744 | T-complex protein 1 subunit epsilon; |
| GO term | Description | Category |
|---|---|---|
| GO:0006457 | protein folding | biological_process |
| GO:0044267 | cellular protein metabolic process | biological_process |
| GO:0051082 | unfolded protein binding | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| K09497 | T-complex protein 1 subunit epsilon | - |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
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