Gene detail

Detail information of MD16G1013600 Annotation

Gene ID	Annotation
MD16G1013600	purple acid phosphatase 3

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0105	CTR1/EDR1 Kinase tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2] gibberellin 3-beta-dioxygenase [EC:1.14.11.15] large subunit ribosomal protein L7Ae

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD16G1013600	mRNA	Chr16	1051623	1054883	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT1G14700.1	1	ATPAP3;PAP3\|purple acid phosphatase 3
Arabidopsis thaliana	AT2G01890.1	1	ATPAP8;PAP8\|PURPLE ACID PHOSPHATASE 8
Arabidopsis thaliana	AT1G14700.2	0.97	ATPAP3;PAP3\|purple acid phosphatase 3
Arabidopsis thaliana	AT2G01890.2	0.698	ATPAP8;PAP8\|PURPLE ACID PHOSPHATASE 8
Pyrus x bretschneideri	Pbr012159.1	1	-
Nicotiana benthamiana	Niben101Scf03022g00004.1	1	Purple acid phosphatase 3
Oryza sativa	LOC_Os10g02750.1	1	"Ser/Thr protein phosphatase family protein, putative, expressed"
Oryza sativa	LOC_Os11g34710.1	1	"Ser/Thr protein phosphatase family protein, putative, expressed"
Zea mays	GRMZM2G152447_P01	1	-
Zea mays	GRMZM2G152477_P01	1	Purple acid phosphatase 1

Gene Ontology

GO term	Description	Category
GO:0016787	hydrolase activity	molecular_function

KEGG

KO	Description	Enzyme
K14379	tartrate-resistant acid phosphatase type 5	EC:3.1.3.2

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00149.24	Metallophos	69	255	1.00E-19

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	4.52432
SRR5252888	dormant buds	no	dormant buds(0 month)	0
SRR5252889	dormant buds	no	dormant buds(0 month)	0.280288
SRR5252886	dormant buds	no	dormant buds(1 months)	0
SRR5252887	dormant buds	no	dormant buds(1 months)	0.21777
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0
SRR5252883	dormant buds	no	dormant buds(3 months)	0.09502
SRR5252880	dormant buds	no	dormant buds(4 months)	0
SRR5252881	dormant buds	no	dormant buds(4 months)	0
SRR5252878	bud break	no	bud break	0.346726
SRR5252879	bud break	no	bud break	0.288361
SRR3744766	flower	no	mature	1.77183
SRR3744767	flower	no	mature	1.78105
SRR3744768	flower	no	mature	1.3755
SRR6308190	stigmas	no	open flowers	0.548521
SRR6308181	styles	no	open flowers	0.470948
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	0
SRR6308193	receptacles	no	open flowers	0
SRR6308189	ovaries	no	open flowers	0.284844
SRR3384922	fruit	no	1 week after full bloom	0.0816451
SRR3384921	fruit	no	2 week after full bloom	0
SRR3384920	fruit	no	3 week after full bloom	0
SRR3384919	fruit	no	4 week after full bloom	0
SRR3384923	fruit	no	5 week after full bloom	0
SRR3384918	fruit	no	6 week after full bloom	0
SRR3384917	fruit	no	8 week after full bloom	0
SRR3384916	fruit	no	10 week after full bloom	0
SRR3384915	fruit	no	12 week after full bloom	0
SRR3384914	fruit	no	14 week after full bloom	0
SRR3384913	fruit	no	16 week after full bloom	0
SRR3384912	fruit	no	18 week after full bloom	0.0905271
SRR3384911	fruit	no	19 week after full bloom	0
SRR3384910	fruit	no	20 week after full bloom	0
SRR768128	whole fruit	no	25 days post anthesis	0.19607
SRR768129	whole fruit	no	35 days post anthesis	0.215314
SRR768130	whole fruit	no	60 days post anthesis	0
SRR768131	whole fruit	no	87 days post anthesis	0.135862
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.0452551
SRR7403506	fruit	uninfected	mature	0.0956107
SRR7403507	fruit	uninfected	mature	0.113522
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	0.0242668
SRR1613974	Central seeds	no	20DAPF	0.150047
SRR1613975	Central seeds	no	20DAPF	0.067904
SRR1613976	Lateral seeds	no	20DAPF	0.178566
SRR1613977	Lateral seeds	no	20DAPF	0.151949
SRR1613978	Lateral seeds	no	20DAPF	0.105737
SRR3744786	stem	no	mature	0.303866
SRR3744787	stem	no	mature	0.225616
SRR3744772	stem	no	mature	0.300024
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.255358
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	1.06325
SRR1089478	leaf	Virus-free	plantlets	2.81334
SRR1089477	leaf	ASGV-infected	plantlets	2.30352
SRR767660	leaf	uninfected	fully developed	0.475328
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0.456054
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0
SRR6308182	young leaf	no	immature leaves	0.294455
SRR3744769	leaf	no	mature	1.70456
SRR3744770	leaf	no	mature	1.10582
SRR3744771	leaf	no	mature	1.5353
SRR5405145	leaf	no	mature	0
SRR6320561	leaf	no	mature	0.20412