| Gene ID | Annotation |
|---|---|
| MD16G1193800 | S18 ribosomal protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0802 | guanyl nucleotide binding G-protein beta/gamma-subunit complex binding G-protein coupled receptor binding extrinsic component of cytoplasmic side of plasma membrane adenylate cyclase-modulating G-protein coupled receptor signaling pathway regulation of root morphogenesis histone binding RNA binding response to mannitol signal transducer activity structural constituent of ribosome obsolete GTP catabolic process GTPase activity cytosolic small ribosomal subunit heterotrimeric G-protein complex mitochondrial ribosome small subunit ribosomal protein S18e large subunit ribosomal protein L47 small subunit ribosomal protein S15e H/ACA ribonucleoprotein complex subunit 3 response to glucose translation chromatin silencing by small RNA response to fructose gravitropism thigmotropism Cajal body RNA methylation response to sucrose |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD16G1193800 | mRNA | Chr16 | 17200191 | 17202562 | + |
| CDS: |
| MD16G1193800 |
| Protein: |
| MD16G1193800 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT1G34030.1 | 1 | Ribosomal protein S13/S18 family |
| Arabidopsis thaliana | AT4G09800.1 | 1 | RPS18C|S18 ribosomal protein |
| Arabidopsis thaliana | AT1G22780.1 | 1 | PFL;PFL1;RPS18A|POINTED FIRST LEAVES;POINTED FIRST LEAVES 1;40S RIBOSOMAL PROTEIN S18 |
| Prunus persica | Prupe.1G013500.1.p | 1 | Ribosomal protein S13/S18 family |
| Pyrus communis | PCP023744.1 | 1 | - |
| Pyrus communis | PCP012310.1 | 1 | - |
| Pyrus x bretschneideri | Pbr037087.2 | 1 | - |
| Pyrus x bretschneideri | Pbr011837.1 | 1 | - |
| Rubus occidentalis | Ro04_G21150 | 1 | - |
| Fragaria vesca | mrna09859.1 | 1 | Ribosomal protein S13/S18 family |
| Vitis vinifera | GSVIVT01034582001 | 1 | Ribosomal protein S13/S18 family |
| Solanum lycopersicum | Solyc06g073370.2.1 | 0.667 | S18 ribosomal protein |
| Solanum lycopersicum | Solyc11g005680.1.1 | 0.8 | Ribosomal protein S13/S18 family |
| Solanum lycopersicum | Solyc03g078290.2.1 | 1 | Ribosomal protein S13/S18 family |
| Populus trichocarpa | Potri.005G196600.1 | 1 | Ribosomal protein S13/S18 family |
| Nicotiana benthamiana | Niben101Scf03848g09003.1 | 1 | 30S ribosomal protein S13 |
| Nicotiana benthamiana | Niben101Scf01349g04004.1 | 1 | 30S ribosomal protein S13 |
| Nicotiana benthamiana | Niben101Scf09436g05005.1 | 0.846 | 30S ribosomal protein S13 |
| Nicotiana benthamiana | Niben101Scf01339g02017.1 | 0.846 | 30S ribosomal protein S13 |
| Nicotiana benthamiana | Niben101Scf04448g02007.1 | 0.769 | 30S ribosomal protein S13 |
| Nicotiana benthamiana | Niben101Scf03203g07006.1 | 0.615 | 30S ribosomal protein S13 |
| Oryza sativa | LOC_Os03g58050.1 | 1 | "ribosomal protein S13p/S18e, putative, expressed" |
| Oryza sativa | LOC_Os07g07709.1 | 1 | "ribosomal protein S13p/S18e, putative, expressed" |
| Zea mays | GRMZM2G178341_P01 | 1 | 40S ribosomal protein S18; |
| GO term | Description | Category |
|---|---|---|
| GO:0003735 | structural constituent of ribosome | molecular_function |
| GO:0005840 | ribosome | cellular component |
| GO:0003723 | RNA binding | molecular_function |
| GO:0006412 | translation | biological_process |
| KO | Description | Enzyme |
|---|---|---|
| K02964 | small subunit ribosomal protein S18e | - |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 |