| Gene ID | Annotation |
|---|---|
| MD16G1239400 | Arginine decarboxylase |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0947 | small subunit ribosomal protein S13 large subunit ribosomal protein L28 speckle-type POZ protein regulation of protein ubiquitination interchromatin granule small ribosomal subunit 3-box |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD16G1239400 | mRNA | Chr16 | 25392882 | 25396109 | + |
| CDS: |
| MD16G1239400 |
| Protein: |
| MD16G1239400 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Prunus persica | Prupe.1G065500.1.p | 1 | - |
| Pyrus communis | PCP020505.1 | 1 | - |
| Pyrus x bretschneideri | Pbr011926.1 | 1 | - |
| Rosa multiflora | Rmu_sc0000361.1_g000052.1 | 1 | - |
| Rosa multiflora | Rmu_sc0001074.1_g000007.1 | 1 | - |
| Rubus occidentalis | Ro04_G12633 | 1 | - |
| Fragaria vesca | mrna12230.1 | 1 | - |
| Solanum lycopersicum | Solyc07g015980.2.1 | 1 | - |
| Populus trichocarpa | Potri.018G145600.5 | 1 | - |
| Nicotiana benthamiana | Niben101Scf02530g02010.1 | 1 | Arginine decarboxylase |
| Zea mays | GRMZM2G100920_P01 | 1 | Putative |
| GO term | Description | Category |
|---|---|---|
| GO:0003824 | catalytic activity | molecular_function |
| GO:0030170 | pyridoxal phosphate binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01276.16 | OKR_DC_1 | 81 | 386 | 5.40E-70 |
| PF03711.11 | OKR_DC_1_C | 500 | 548 | 2.70E-08 |
 |