Gene ID | Annotation |
---|---|
MD16G1245800 | senescence-associated gene 12 |
Network Category | Global Network | Conditional network (different tissues and developmental stages) |
---|---|---|
Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
Method | Module ID | Function Annotation |
---|---|---|
Co-expression network | CFinderM0043 |
more details in UCSC | details of chromatin state |
Gene | Type | Chr | Start | End | Strand |
---|---|---|---|---|---|
MD16G1245800 | mRNA | Chr16 | 27148196 | 27149393 | + |
CDS: |
MD16G1245800 |
Protein: |
MD16G1245800 |
Gene family | Subfamily |
---|---|
-- | -- |
Species | Gene ID | Score of Inparanoid | Annotation |
---|---|---|---|
Oryza sativa | LOC_Os04g13090.1 | 1 | "vignain precursor, putative" |
Oryza sativa | LOC_Os12g17540.1 | 1 | "vignain precursor, putative" |
Zea mays | GRMZM2G095628_P01 | 1 | - |
Zea mays | GRMZM2G137690_P01 | 1 | - |
GO term | Description | Category |
---|---|---|
GO:0006508 | proteolysis | biological_process |
GO:0008234 | cysteine-type peptidase activity | molecular_function |
KO | Description | Enzyme |
---|---|---|
-- | -- | -- |
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
PF08246.8 | Inhibitor_I29 | 41 | 98 | 2.40E-17 |
PF00112.19 | Peptidase_C1 | 125 | 273 | 5.40E-55 |
PF00112.19 | Peptidase_C1 | 277 | 322 | 4.40E-14 |