Gene detail

Detail information of MD17G1086100 Annotation

Gene ID	Annotation
MD17G1086100	Protein of unknown function

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0667	xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2] purine nucleobase catabolic process superoxide anion generation xanthine metabolic process sucrose catabolic process xanthine dehydrogenase activity (1->3)-beta-D-glucan binding sucrose alpha-glucosidase activity beta-fructofuranosidase activity GH100

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD17G1086100	mRNA	Chr17	7068321	7070519	+

Sequences

CDS:

MD17G1086100

TTCTTCAATTTGGAAATGAACTTATCATACAAAAACCCAGTTCTAGTACTCAAACCTCTCTCTGTGTCTGGGTTCCACCAAACGAATATCTTCTATTTTTCATGGACCCTCATTGCCCTTTAGTCTTTATAAAATTATTGAACGCAAAAGTAGTTGCGAACTAGTGTACTATGAGTGCCCACTGTACTTCGTGAAACTCCAAACACAGAGTACCCGGAACGTCTCTCTGCTTAAATCGAGAGGTCACGGTTCCTTTTCATCTGGATCATAATCCCCATCGATATCACATCACACCATTTCTAGAGAGAGAACTCCCTCTTCTACAGAGAGAGACCAGAGAAGATGAAAAAAAACCAGTCCTTCCATCTGGGTTTCTACTAATTTCGTTTCTCACTCTAATTTCTGTTCAAAGTTTGTGGCTTAGGGTTTGAGGAGAGAGAAAGTGCAGCCTTTTCTTCTCCTCTGAATATTTTCAGAATCTCTTCCCTTTTCCAACTTTTTCCATTTCATAATTTAAAAAACAACACCATAAAGTTGTCACCTTTCTCAAACAAAAAACAAAACCAGATTTCAAAGTCCTCACCTTTCATCATTTTTCTCCAAAACAAGCTTACTTTACTCCCAAAATGTCATCATTTCTTCCCACCTCCGCTCTCACATTCTTCCTCCTCCTCTTATTAATATCCAGCTTCCACATTTCCCTCGCCGGTCTACTCGCCGAACCGGTCACCGGTCACCCCCAGCCGCTCAAACCGGGGGAATACTCCAGCCCCAACACCATCCCGGCCCTCCCGTCCCAAACCCAGACCCAAACCTGCCACCTTGACCTCTCCGCGGAGCTCTTCGGCGGTGTCAGCCAAGCATGCGGCCGAGACCTCGACCGGAGCCGGTGCTGCCCTGTTTTAGCCGCCTGGCTCTTCGCCGCCCACGCCAGATCAGCCCTCGAGCTCCCCTCGTCGGATACGGCTCCCTCGGCGGTGCCCGACCAGCCGATGATGCCGGACGACTCGCAGAAGTGCGTCAACTCGCTGCAGTCCTCGCTCGTCAGCCGGAACATTCGGATTCCTCAGCCCAACGCCAGCTGCGACGCCGTTCTGTGCTTCTGCGGAATCCGGCTCCACCAGATCGGCTCCCTGAGCTGCCCCGCTGCCTTCAACGTGTCTCGAGGATTTCACAACGCCACCCCCACCGCCGCCGTCAGGAATCTCGAGAAGAACTGCCGCAACTCTTCGTACTCTGGATGCACCAAGTGCCTTGGAGCTCTCCAGAAGCTCAAGGGAGGGAGCAAGAACGGAACGGCGGGGGAGAGGAGCACGAGCGAGAGAGCGAACAAGATGTTCAACCTTGACTGCCAGCTAATGGGGCTGACGTGGCTCCTCGCCCGGAACAAAACGGCGTACATTCCGACCGTTTCGGCCGTGTTGCGCGCCATAATGTACAGCGCGCACCCGCATCACGAGAACACGTGTAGCCCGGACCAGGAGAACATGCCGCTGGCCGTGGATTCGCTGCAGATCGAGAACGGGCAAGGGTTCGCCGCATCGCCGCCGTCCATCTTGATGTTACCGATTCTCCCTCTGATCATTTGGGCGTCTCTGTTTGTTTAGGGGAATCCGGGTGTGTGTGAGGTTTTGGGACCTGCCTTGTCTGCTCTTTTACTTTCCATACATTTTCATCCTTTTTTTTATTTGCGCGATCATAAGTCACGTTAATATTTTATATTATTATTTTTATAAAAAATTAATATAAAATATTAACGTGATTTAATAATAAAAAAAAATGGTAAAAGAAAATGAGAGAGCATGAGAAGGGAAAGGGCAGATAAGCTGGATCCGAGGTTTTGCCCATTTTTTTGGTAGTCTCTGACACCCGGTCGTGTCGGGTCACGTGACGCAAGTGGACAAGACGGGCCAGTTGAGTTGTTTTTGTCATTTTGCCCACTGTAAATTTCAGCTCGGTTTCGAAATTGTAGTCAAAATTGTAGTAAGTAATAATTAGTTCCTCACATGGGGAGAGATTCACTTCCAATACAGTAGACACAGGATGCCACGGCAATCTGCAGTGGTTCTGGGTTGGTGTTTTAAGTCATGCACGCAAAAATGACTTATATGAA

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT4G28100.1	1	unknown protein
Prunus persica	Prupe.3G228400.1.p	1	-
Pyrus communis	PCP016590.1	1	-
Pyrus x bretschneideri	Pbr011267.1	1	-
Rosa multiflora	Rmu_co8294437.1_g000001.1	1	-
Rubus occidentalis	Ro06_G05518	1	-
Fragaria vesca	mrna01993.1	1	-
Vitis vinifera	GSVIVT01000458001	1	-
Solanum lycopersicum	Solyc07g054850.2.1	1	-
Populus trichocarpa	Potri.013G148700.1	1	-
Nicotiana benthamiana	Niben101Scf02271g05005.1	1	BnaC01g20640D [Brassica napus]
Nicotiana benthamiana	Niben101Scf03040g04004.1	1	BnaC01g20640D [Brassica napus]
Oryza sativa	LOC_Os07g37156.1	1	expressed protein
Zea mays	GRMZM2G041645_P01	1	-
Zea mays	GRMZM2G414995_P01	0.753	-

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	1.15571
SRR5252888	dormant buds	no	dormant buds(0 month)	0.233129
SRR5252889	dormant buds	no	dormant buds(0 month)	0.180045
SRR5252886	dormant buds	no	dormant buds(1 months)	0.394858
SRR5252887	dormant buds	no	dormant buds(1 months)	0
SRR5252884	dormant buds	no	dormant buds(2 months)	0.0837739
SRR5252882	dormant buds	no	dormant buds(3 months)	0.0840207
SRR5252883	dormant buds	no	dormant buds(3 months)	0.0915548
SRR5252880	dormant buds	no	dormant buds(4 months)	0.586973
SRR5252881	dormant buds	no	dormant buds(4 months)	0.604979
SRR5252878	bud break	no	bud break	1.08576
SRR5252879	bud break	no	bud break	0.879842
SRR3744766	flower	no	mature	1.01428
SRR3744767	flower	no	mature	0.733756
SRR3744768	flower	no	mature	0.873487
SRR6308190	stigmas	no	open flowers	0.268034
SRR6308181	styles	no	open flowers	0.288346
SRR6308188	filaments	no	open flowers	0.865019
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.26803
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0.295971
SRR6308194	sepals	no	open flowers	0
SRR6308193	receptacles	no	open flowers	0.800648
SRR6308189	ovaries	no	open flowers	0.929785
SRR3384922	fruit	no	1 week after full bloom	5.97777
SRR3384921	fruit	no	2 week after full bloom	10.2592
SRR3384920	fruit	no	3 week after full bloom	7.08432
SRR3384919	fruit	no	4 week after full bloom	7.61836
SRR3384923	fruit	no	5 week after full bloom	7.44259
SRR3384918	fruit	no	6 week after full bloom	3.59267
SRR3384917	fruit	no	8 week after full bloom	1.1644
SRR3384916	fruit	no	10 week after full bloom	0.343786
SRR3384915	fruit	no	12 week after full bloom	0.244058
SRR3384914	fruit	no	14 week after full bloom	0.0789005
SRR3384913	fruit	no	16 week after full bloom	0.278795
SRR3384912	fruit	no	18 week after full bloom	0.174423
SRR3384911	fruit	no	19 week after full bloom	0.167292
SRR3384910	fruit	no	20 week after full bloom	0.0654925
SRR768128	whole fruit	no	25 days post anthesis	3.74361
SRR768129	whole fruit	no	35 days post anthesis	5.77627
SRR768130	whole fruit	no	60 days post anthesis	3.66439
SRR768131	whole fruit	no	87 days post anthesis	0.197016
SRR7343308	immature fruit flesh	no	immature	3.01909
SRR7343309	immature fruit flesh	no	immature	3.24341
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.0218535
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0.0469018
SRR1613973	Central seeds	no	20DAPF	0.846612
SRR1613974	Central seeds	no	20DAPF	1.46218
SRR1613975	Central seeds	no	20DAPF	2.05095
SRR1613976	Lateral seeds	no	20DAPF	1.33247
SRR1613977	Lateral seeds	no	20DAPF	1.24496
SRR1613978	Lateral seeds	no	20DAPF	1.15791
SRR3744786	stem	no	mature	0.539738
SRR3744787	stem	no	mature	0.409268
SRR3744772	stem	no	mature	0.603427
SRX765691	seedling shoot apex	no	4-6 week old seedling	3.29972
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	3.23806
SRR1089478	leaf	Virus-free	plantlets	5.37747
SRR1089477	leaf	ASGV-infected	plantlets	4.3475
SRR767660	leaf	uninfected	fully developed	0.922157
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	5.5841
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	2.22813
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0.800959
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.489865
SRR6308182	young leaf	no	immature leaves	3.31459
SRR3744769	leaf	no	mature	0.515313
SRR3744770	leaf	no	mature	0.463994
SRR3744771	leaf	no	mature	0.399532
SRR5405145	leaf	no	mature	0.538749
SRR6320561	leaf	no	mature	0.298218