Functional Module

Module Search Results

CFinderM0956's details annotation

Protein:
Green color--interaction proteins Red color--up-regulated proteins Red color--up-regulated proteins Blue color--down-regulated proteins
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein
Blue--proteins own interaction and negative co-expression relationship with target protein

Module annotation (GSEA enrichment result)

Function Annotation	FDR	Category
chloroplast relocation	0.00063	GO:0009902
iron-sulfur cluster assembly	0.00063	GO:0016226
coatomer subunit delta	0.0017	KEGG
thylakoid membrane organization	0.0029	GO:0010027
rRNA processing	0.0029	GO:0006364
aromatic amino acid family biosynthetic process	0.0091	GO:0009073
transcription from plastid promoter	0.011	GO:0042793
positive regulation of transcription	0.012	GO:0045893
base conversion or substitution editing	0.012	GO:0016553
RNA stabilization	0.012	GO:0043489
chloroplast stroma	0.014	GO:0009570
plastid inner membrane	0.014	GO:0009528
plastid outer membrane	0.014	GO:0009527
clathrin adaptor complex	0.022	GO:0030131
chloroplast thylakoid membrane	0.022	GO:0009535
photosystem II assembly	0.025	GO:0010207
regulation of protein dephosphorylation	0.025	GO:0035304
protein import into chloroplast thylakoid membrane	0.036	GO:0045038
de-etiolation	0.049	GO:0009704
isopentenyl diphosphate biosynthetic process	0.049	GO:0019288
chloroplast envelope	0.05	GO:0009941

Module member annotation

Gene ID	Annotation	Orthologue in Arabidopsis
MD02G1308600	RNA binding	AT3G08010
MD09G1097200	photosystem II reaction center PSB29 protein	AT2G20890
MD09G1291100	Ubiquitin carboxyl-terminal hydrolase family protein	AT4G01037
MD15G1189200	ATP binding	AT3G24430
MD17G1020900	31-kDa RNA binding protein	--
MD17G1280500	clathrin adaptor complexes medium subunit family protein	AT5G05010