Detail information of GWHGAAZE000322


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002267440.11.2604E-118PREDICTED: uncharacterized protein LOC100258985 isoform X1 [Vitis vinifera]
trEMBLtr|D7TIM5|D7TIM5_VITVI3E-118Putative uncharacterized protein {ECO:0000313|EMBL:CBI30101.3}
TAIR10AT3G55600.15E-84Membrane fusion protein Use1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene63362816341304-
GWHAAZE00000001mRNA63362816341304-
GWHAAZE00000001exon63362816336457-
GWHAAZE00000001exon63383486338447-
GWHAAZE00000001exon63389756339079-
GWHAAZE00000001exon63391646339261-
GWHAAZE00000001exon63396506339722-
GWHAAZE00000001exon63405866340653-
GWHAAZE00000001exon63407766340868-
GWHAAZE00000001exon63411526341304-
GWHAAZE00000001CDS63411526341304-
GWHAAZE00000001CDS63407766340868-
GWHAAZE00000001CDS63405866340653-
GWHAAZE00000001CDS63396506339722-
GWHAAZE00000001CDS63391646339261-
GWHAAZE00000001CDS63389756339079-
GWHAAZE00000001CDS63383486338447-
GWHAAZE00000001CDS63362816336457-
Transcript Sequence

Network for GWHGAAZE000322

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09753.10Use1592884.20E-63
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08507USE1 SNARE interactions in vesicular transport map04130

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf52.820
SRR3591706second leaf30.704
SRR3591707mature leaf25.009
SRR3591708Shoot apex58.526
SRR3591709Stem56.805
SRR3591710White floral bud53.507
SRR3591711White flower46.699
SRR3591712Green floral bud59.894
SRR3591713Yellow flower62.849
SRP173429 SRR8316895Juvenile bud stage 28.029
SRR8316896Juvenile bud stage 44.038
SRR8316897Juvenile bud stage 23.048
SRR8316894Third green stage 20.626
SRR8316900Third green stage 62.490
SRR8316901Third green stage 56.721
SRR8316898Complete white stage 25.242
SRR8316899Complete white stage 64.064
SRR8316903Complete white stage 38.909
SRR8316902Silver flowering stage30.711
SRR8316904Silver flowering stage36.398
SRR8316905Silver flowering stage17.917
SRR8316906Gold flowering stage 61.718
SRR8316907Gold flowering stage 66.760
SRR8316908Gold flowering stage 57.370
SRP132670SRR6706286Control44.529
SRR6706287Light intensity 50%47.458
SRR6706288Light intensity 20%53.816
CNP0000432CNS0095592Slightly white alabastrum(diploid) 160.798
CNS0095593Slightly white alabastrum(diploid) 268.971
CNS0095594Slightly white alabastrum(diploid) 358.815
CNS0095595Whole white alabastrum(diploid) 263.021
CNS0095596Whole white alabastrum(diploid) 370.780
CNS0095597Whole white alabastrum(diploid) 465.633
CNS0095598Silvery flower (diploied) 153.650
CNS0095599Silvery flower (diploied) 255.502
CNS0095600Silvery flower (diploied) 348.973
CNS0095601Golden flower (diploid) 153.740
CNS0095602Golden flower (diploid) 244.971
CNS0095603Golden flower (diploid) 341.183
CNS0095604Slightly white alabastrum(tetraploid) 157.769
CNS0095605Slightly white alabastrum(tetraploid) 257.816
CNS0095606Slightly white alabastrum(tetraploid) 350.471
CNS0095607Whole white alabastrum(tetraploid) 155.625
CNS0095608Whole white alabastrum(tetraploid) 254.782
CNS0095609Whole white alabastrum(tetraploid) 356.105
CNS0095610Silvery flower (diploied) 154.330
CNS0095611Silvery flower (diploied) 251.972
CNS0095612Silvery flower (diploied) 367.188
CNS0095613Golden flower (tetraploid) 142.717
CNS0095614Golden flower (tetraploid) 243.265
CNS0095615Golden flower (tetraploid) 342.305
CRA001975CRR073297Stem 164.986
CRR073298Stem 254.598
CRR073299Stem 355.518
CRR073300Leaf 175.907
CRR073301Leaf 265.939
CRR073302Leaf 363.789
CRR073303Juvenile bud 165.120
CRR073304Juvenile bud 254.598
CRR073305Juvenile bud 349.930
CRR073306Third green 135.901
CRR073307Third green 244.018
CRR073308Third green 335.619
CRR073309Second white 134.045
CRR073310Second white 243.959
CRR073311Second white 333.650
CRR073312Silver flowering 126.903
CRR073313Silver flowering 231.951
CRR073314Silver flowering 318.595
CRR073315Gold flowering 133.431
CRR073316Gold flowering 237.693
CRR073317Gold flowering 329.033
CRR073318Tawny withering 145.989
CRR073319Tawny withering 248.288
CRR073320Tawny withering 347.987