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Detail information of GWHGAAZE000322
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_002267440.1
1.2604E-118
PREDICTED: uncharacterized protein LOC100258985 isoform X1 [Vitis vinifera]
trEMBL
tr|D7TIM5|D7TIM5_VITVI
3E-118
Putative uncharacterized protein {ECO:0000313|EMBL:CBI30101.3}
TAIR10
AT3G55600.1
5E-84
Membrane fusion protein Use1
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000001
gene
6336281
6341304
-
GWHAAZE00000001
mRNA
6336281
6341304
-
GWHAAZE00000001
exon
6336281
6336457
-
GWHAAZE00000001
exon
6338348
6338447
-
GWHAAZE00000001
exon
6338975
6339079
-
GWHAAZE00000001
exon
6339164
6339261
-
GWHAAZE00000001
exon
6339650
6339722
-
GWHAAZE00000001
exon
6340586
6340653
-
GWHAAZE00000001
exon
6340776
6340868
-
GWHAAZE00000001
exon
6341152
6341304
-
GWHAAZE00000001
CDS
6341152
6341304
-
GWHAAZE00000001
CDS
6340776
6340868
-
GWHAAZE00000001
CDS
6340586
6340653
-
GWHAAZE00000001
CDS
6339650
6339722
-
GWHAAZE00000001
CDS
6339164
6339261
-
GWHAAZE00000001
CDS
6338975
6339079
-
GWHAAZE00000001
CDS
6338348
6338447
-
GWHAAZE00000001
CDS
6336281
6336457
-
Transcript Sequence
>GWHTAAZE000322 ATGACTAGGGAAGATGGTGATCACAGGCTCACTCAAAATGAGATATTGATGGGGATTATGGCAGCGATTATGACATTAGAAGTTTTAGGTAATATAGACGTGGCACCCGACACTTGTATATATCATCATACATTGCAATTCTCATCTTGTGTGGGTCTTATGACGGGCTTGAGTAAAACCGAAGTAAACCTGAGGAGGTTGCTTAACACTGCTCCTCAGCAACAAAATCAGGCAAAGCTTGTACATTATGTTGCTACATTACGAGAACAGTTGGAACAACTGGCTGAAGAGAAGACTTCAGATGGATTGCCTAGGATTTCAAAAGCTAAGGTGAATGAATATTCAGAGAGAATTGAAGCAATTGCTGCCAAATTAGCTACACCCTTGCCTGTAATACAAGTAAATGAGGAGCCTGTTGCTGGAACTTCTGTCAGTGAAAGTCATTCTAGAACTGAAGGTTTACCAGGATTGAGGAGGAGATTTGTTCCCCCAACGAATCAGGGAAATAAAGTGCGTACCACCGTCGAAGCTGATCAATCAGGGTCTGTCAAATTGGATGCTGCGGCACAGACACATATTGAGAAGCACAGAAAGCTTCAAGAGGACTTGACAGATGAAATGGTTGGCTTGGCACGACAACTGAAAGAGAGTAGTCTCATGATGAATCGGTCCATAAATAATACCGAAAAAATACTTGATTCGACTGAGAAAGCAGTTGAACATAGCTTGGCAAGCACGGGTCGTGCAAATGTAAGGGCTATGGAGGTATACTCGCACAGTTTCAAGACTACGTGTTTCACTTGGCTCATGATCTTTGCCATGACTTGTATTTTCGTCATGGTTGTGCTTCTTATTCGTGTTACTTAA
Network for GWHGAAZE000322
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF09753.10
Use1
59
288
4.20E-63
Protein Sequence
>GWHPAAZE000322 MTREDGDHRLTQNEILMGIMAAIMTLEVLGNIDVAPDTCIYHHTLQFSSCVGLMTGLSKTEVNLRRLLNTAPQQQNQAKLVHYVATLREQLEQLAEEKTSDGLPRISKAKVNEYSERIEAIAAKLATPLPVIQVNEEPVAGTSVSESHSRTEGLPGLRRRFVPPTNQGNKVRTTVEADQSGSVKLDAAAQTHIEKHRKLQEDLTDEMVGLARQLKESSLMMNRSINNTEKILDSTEKAVEHSLASTGRANVRAMEVYSHSFKTTCFTWLMIFAMTCIFVMVVLLIRVT
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K08507
USE1
SNARE interactions in vesicular transport
map04130
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
52.820
SRR3591706
second leaf
30.704
SRR3591707
mature leaf
25.009
SRR3591708
Shoot apex
58.526
SRR3591709
Stem
56.805
SRR3591710
White floral bud
53.507
SRR3591711
White flower
46.699
SRR3591712
Green floral bud
59.894
SRR3591713
Yellow flower
62.849
SRP173429
SRR8316895
Juvenile bud stage
28.029
SRR8316896
Juvenile bud stage
44.038
SRR8316897
Juvenile bud stage
23.048
SRR8316894
Third green stage
20.626
SRR8316900
Third green stage
62.490
SRR8316901
Third green stage
56.721
SRR8316898
Complete white stage
25.242
SRR8316899
Complete white stage
64.064
SRR8316903
Complete white stage
38.909
SRR8316902
Silver flowering stage
30.711
SRR8316904
Silver flowering stage
36.398
SRR8316905
Silver flowering stage
17.917
SRR8316906
Gold flowering stage
61.718
SRR8316907
Gold flowering stage
66.760
SRR8316908
Gold flowering stage
57.370
SRP132670
SRR6706286
Control
44.529
SRR6706287
Light intensity 50%
47.458
SRR6706288
Light intensity 20%
53.816
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
60.798
CNS0095593
Slightly white alabastrum(diploid) 2
68.971
CNS0095594
Slightly white alabastrum(diploid) 3
58.815
CNS0095595
Whole white alabastrum(diploid) 2
63.021
CNS0095596
Whole white alabastrum(diploid) 3
70.780
CNS0095597
Whole white alabastrum(diploid) 4
65.633
CNS0095598
Silvery flower (diploied) 1
53.650
CNS0095599
Silvery flower (diploied) 2
55.502
CNS0095600
Silvery flower (diploied) 3
48.973
CNS0095601
Golden flower (diploid) 1
53.740
CNS0095602
Golden flower (diploid) 2
44.971
CNS0095603
Golden flower (diploid) 3
41.183
CNS0095604
Slightly white alabastrum(tetraploid) 1
57.769
CNS0095605
Slightly white alabastrum(tetraploid) 2
57.816
CNS0095606
Slightly white alabastrum(tetraploid) 3
50.471
CNS0095607
Whole white alabastrum(tetraploid) 1
55.625
CNS0095608
Whole white alabastrum(tetraploid) 2
54.782
CNS0095609
Whole white alabastrum(tetraploid) 3
56.105
CNS0095610
Silvery flower (diploied) 1
54.330
CNS0095611
Silvery flower (diploied) 2
51.972
CNS0095612
Silvery flower (diploied) 3
67.188
CNS0095613
Golden flower (tetraploid) 1
42.717
CNS0095614
Golden flower (tetraploid) 2
43.265
CNS0095615
Golden flower (tetraploid) 3
42.305
CRA001975
CRR073297
Stem 1
64.986
CRR073298
Stem 2
54.598
CRR073299
Stem 3
55.518
CRR073300
Leaf 1
75.907
CRR073301
Leaf 2
65.939
CRR073302
Leaf 3
63.789
CRR073303
Juvenile bud 1
65.120
CRR073304
Juvenile bud 2
54.598
CRR073305
Juvenile bud 3
49.930
CRR073306
Third green 1
35.901
CRR073307
Third green 2
44.018
CRR073308
Third green 3
35.619
CRR073309
Second white 1
34.045
CRR073310
Second white 2
43.959
CRR073311
Second white 3
33.650
CRR073312
Silver flowering 1
26.903
CRR073313
Silver flowering 2
31.951
CRR073314
Silver flowering 3
18.595
CRR073315
Gold flowering 1
33.431
CRR073316
Gold flowering 2
37.693
CRR073317
Gold flowering 3
29.033
CRR073318
Tawny withering 1
45.989
CRR073319
Tawny withering 2
48.288
CRR073320
Tawny withering 3
47.987