Gene detail

Detail information of GWHGAAZE000402

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007050084.1	1.98991E-97	Glutathione S-transferase tau 7 [Theobroma cacao]
Swissprot	tr\|Q9FQA3\|GST23_MAIZE	6E-64	Glutathione transferase GST 23
trEMBL	tr\|A0A061DQ92\|A0A061DQ92_THECC	7E-98	Glutathione S-transferase tau 7 {ECO:0000313\|EMBL:EOX94241.1}
TAIR10	AT2G29420.1	4E-48	glutathione S-transferase tau 7

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	7783874	7785280	-
GWHAAZE00000001	mRNA	7783874	7785280	-
GWHAAZE00000001	exon	7783874	7784235	-
GWHAAZE00000001	exon	7784616	7784691	-
GWHAAZE00000001	exon	7784972	7785280	-
GWHAAZE00000001	CDS	7784972	7785280	-
GWHAAZE00000001	CDS	7784616	7784691	-
GWHAAZE00000001	CDS	7783874	7784235	-

Transcript Sequence
>GWHTAAZE000404 ATGGAAGAAGTGAAATTAATAGGAACGTGGCCAAGTCCATTTAGTTACAGAGTGATATGGGCTCTGAAACTAAAAGGAGTTAAATACGAGTATGTAGAAGAGGATCTTTCAAACAAGAGTGAGATGCTCTTAAAGTACAATCCAGTTCACAAAAAGATACCAGTTCTTGTTCATGGTGGTAGAGCAATAGCAGAGTCCACTGTTATTCTTGAGTATATTGAAGAGACCTGGCCAAATAATCCCCTGCTTCCAATTGACCCATTTGAGAAGGCTCGGGCCAGGTTCTGGATTAAGTTTGCGGAAGATAAGATTCACGTTAGTGGTGGTGGTGACAATGGCAACATGGCGGTGGTGGAGCTGGGGTGGCTTCATTGTGGTGGCAGTGGAAGTACATTTGGTACTGTCAACCGTACAGTAGGAGAAGAACAAGTGAAGGCAACTAAAGAAGCAAAAGAAGTGCTGAGAGTCATAGAAGAGCACGCCTTAGGAGGAAAAAATAAATTTTTCTGTGGCGATAAAATTGGATTGACTGACCTAGTTTTCGGATGGCTAACCGATTGGCTTCAAGTTTTTGAAGAAGTCAACGGCGTGAAATTGCTAGACCACAATAGCTTCCCAAAAATACAGGCTTGGATCGAGAATTTCAAGGAAGATGCTGTCATCAAAGAGAACCGTCCTAATTGTGATGAAATGTTGCTGTATTTTAAGCAAAAGAGGGAGAAGTTCATTGCCTCAGCAACACAATAA

Network for GWHGAAZE000402

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02798.21	GST_N	4	74	2.60E-17
PF00043.26	GST_C	142	215	7.10E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00799	GST, gst	Metabolic pathways	map01100
		Glutathione metabolism	map00480
		Metabolism of xenobiotics by cytochrome P450	map00980
		Drug metabolism - cytochrome P450	map00982
		Drug metabolism - other enzymes	map00983
		Longevity regulating pathway - worm	map04212

Gene Ontology

GO term	Ontology	Name
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	2.560
	SRR3591706	second leaf	4.721
	SRR3591707	mature leaf	19.129
	SRR3591708	Shoot apex	2.322
	SRR3591709	Stem	13.965
	SRR3591710	White floral bud	5.519
	SRR3591711	White flower	44.541
	SRR3591712	Green floral bud	4.115
	SRR3591713	Yellow flower	83.220
SRP173429	SRR8316895	Juvenile bud stage	3.836
	SRR8316896	Juvenile bud stage	8.946
	SRR8316897	Juvenile bud stage	5.815
	SRR8316894	Third green stage	3.496
	SRR8316900	Third green stage	3.243
	SRR8316901	Third green stage	6.054
	SRR8316898	Complete white stage	6.570
	SRR8316899	Complete white stage	10.994
	SRR8316903	Complete white stage	7.420
	SRR8316902	Silver flowering stage	15.649
	SRR8316904	Silver flowering stage	17.207
	SRR8316905	Silver flowering stage	11.417
	SRR8316906	Gold flowering stage	127.870
	SRR8316907	Gold flowering stage	43.584
	SRR8316908	Gold flowering stage	157.266
SRP132670	SRR6706286	Control	5.265
	SRR6706287	Light intensity 50%	3.694
	SRR6706288	Light intensity 20%	2.102
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.821
	CNS0095593	Slightly white alabastrum(diploid) 2	5.330
	CNS0095594	Slightly white alabastrum(diploid) 3	4.360
	CNS0095595	Whole white alabastrum(diploid) 2	3.645
	CNS0095596	Whole white alabastrum(diploid) 3	0.732
	CNS0095597	Whole white alabastrum(diploid) 4	1.558
	CNS0095598	Silvery flower (diploied) 1	11.748
	CNS0095599	Silvery flower (diploied) 2	6.245
	CNS0095600	Silvery flower (diploied) 3	18.962
	CNS0095601	Golden flower (diploid) 1	18.805
	CNS0095602	Golden flower (diploid) 2	27.741
	CNS0095603	Golden flower (diploid) 3	31.762
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.355
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.832
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.636
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.259
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.065
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.251
	CNS0095610	Silvery flower (diploied) 1	21.700
	CNS0095611	Silvery flower (diploied) 2	4.180
	CNS0095612	Silvery flower (diploied) 3	6.443
	CNS0095613	Golden flower (tetraploid) 1	35.013
	CNS0095614	Golden flower (tetraploid) 2	44.466
	CNS0095615	Golden flower (tetraploid) 3	5.934
CRA001975	CRR073297	Stem 1	0.714
	CRR073298	Stem 2	0.430
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.340
	CRR073301	Leaf 2	0.386
	CRR073302	Leaf 3	0.200
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.088
	CRR073307	Third green 2	0.095
	CRR073308	Third green 3	0.175
	CRR073309	Second white 1	0.965
	CRR073310	Second white 2	5.949
	CRR073311	Second white 3	6.462
	CRR073312	Silver flowering 1	9.692
	CRR073313	Silver flowering 2	3.631
	CRR073314	Silver flowering 3	5.295
	CRR073315	Gold flowering 1	2.583
	CRR073316	Gold flowering 2	5.698
	CRR073317	Gold flowering 3	2.099
	CRR073318	Tawny withering 1	15.448
	CRR073319	Tawny withering 2	25.522
	CRR073320	Tawny withering 3	2.824