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Detail information of GWHGAAZE000736
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_006424859.1
8.21362E-65
hypothetical protein CICLE_v10029345mg [Citrus clementina]
trEMBL
tr|V4UFJ9|V4UFJ9_9ROSI
3E-65
Uncharacterized protein {ECO:0000313|EMBL:ESR38099.1}
TAIR10
AT5G59460.1
2E-28
scarecrow-like transcription factor 11 (SCL11)
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000001
gene
14890354
14893587
+
GWHAAZE00000001
mRNA
14890354
14893587
+
GWHAAZE00000001
exon
14890354
14890395
+
GWHAAZE00000001
exon
14891342
14891439
+
GWHAAZE00000001
exon
14891770
14891851
+
GWHAAZE00000001
exon
14891954
14892039
+
GWHAAZE00000001
exon
14893335
14893587
+
GWHAAZE00000001
CDS
14890354
14890395
+
GWHAAZE00000001
CDS
14891342
14891439
+
GWHAAZE00000001
CDS
14891770
14891851
+
GWHAAZE00000001
CDS
14891954
14892039
+
GWHAAZE00000001
CDS
14893335
14893587
+
Transcript Sequence
>GWHTAAZE000738 ATGGCCAAGCGTGAGCTTTCTAGCACTTTGAAGAACTTGAAGTTCATGCAAAGGGCATCTCTGAGAGAGGAGACAACTAAGAAGGAAGAACATGTCACACCTGATGTGAACTTCCCATCTTCTAGTACACCCCGGAAATGTGTGGTCATAATGGAAGGAGATCCTCATCCAGGGGCCATAAAAGGGCGGATGTCTTTTCAAAGTTTCAACCCTAATATTGATAAATTGAATGAAGAAGCTGCAAACCCTAATCAACAAGAAGGCTCTACCACATGTTCTGGAAACCAAAGTGAAGGAATGGCTAATAGAGAAAATGGGTCTGCAGGGGATGGATCAGAAGGCTTGAGACTAGATAGTGAGAACAGCGATGCAATTGGAGACCTTAAAAGGAAAAAACCCGAGGTAGTATCTGAAACAGAATATCCCAATAAATCACCCAAAAACGTTCGCGGTGATCAAGATTCTTCATCGAGTAAGAGTAGTTCTGACAATCAACGTAAGCACGAAAAGCTGGACTGGAACGTTCTAAGGCCTCCAAAGTCTCAAAGGAAAAGAGGGTGA
Network for GWHGAAZE000736
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
--
--
--
--
--
Protein Sequence
>GWHPAAZE000737 MAKRELSSTLKNLKFMQRASLREETTKKEEHVTPDVNFPSSSTPRKCVVIMEGDPHPGAIKGRMSFQSFNPNIDKLNEEAANPNQQEGSTTCSGNQSEGMANRENGSAGDGSEGLRLDSENSDAIGDLKRKKPEVVSETEYPNKSPKNVRGDQDSSSSKSSSDNQRKHEKLDWNVLRPPKSQRKRG
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K12593
MPHOSPH6, MPP6
RNA degradation
map03018
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
17.743
SRR3591706
second leaf
15.836
SRR3591707
mature leaf
13.854
SRR3591708
Shoot apex
31.329
SRR3591709
Stem
22.349
SRR3591710
White floral bud
12.909
SRR3591711
White flower
21.509
SRR3591712
Green floral bud
20.153
SRR3591713
Yellow flower
14.130
SRP173429
SRR8316895
Juvenile bud stage
17.386
SRR8316896
Juvenile bud stage
20.524
SRR8316897
Juvenile bud stage
12.620
SRR8316894
Third green stage
11.752
SRR8316900
Third green stage
24.253
SRR8316901
Third green stage
22.292
SRR8316898
Complete white stage
9.157
SRR8316899
Complete white stage
29.645
SRR8316903
Complete white stage
10.421
SRR8316902
Silver flowering stage
8.692
SRR8316904
Silver flowering stage
9.419
SRR8316905
Silver flowering stage
5.028
SRR8316906
Gold flowering stage
16.685
SRR8316907
Gold flowering stage
14.431
SRR8316908
Gold flowering stage
14.902
SRP132670
SRR6706286
Control
3.767
SRR6706287
Light intensity 50%
5.506
SRR6706288
Light intensity 20%
6.323
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
22.671
CNS0095593
Slightly white alabastrum(diploid) 2
23.973
CNS0095594
Slightly white alabastrum(diploid) 3
29.424
CNS0095595
Whole white alabastrum(diploid) 2
19.436
CNS0095596
Whole white alabastrum(diploid) 3
16.529
CNS0095597
Whole white alabastrum(diploid) 4
16.511
CNS0095598
Silvery flower (diploied) 1
21.510
CNS0095599
Silvery flower (diploied) 2
17.855
CNS0095600
Silvery flower (diploied) 3
13.387
CNS0095601
Golden flower (diploid) 1
13.946
CNS0095602
Golden flower (diploid) 2
12.807
CNS0095603
Golden flower (diploid) 3
14.932
CNS0095604
Slightly white alabastrum(tetraploid) 1
21.253
CNS0095605
Slightly white alabastrum(tetraploid) 2
21.011
CNS0095606
Slightly white alabastrum(tetraploid) 3
34.609
CNS0095607
Whole white alabastrum(tetraploid) 1
15.841
CNS0095608
Whole white alabastrum(tetraploid) 2
10.423
CNS0095609
Whole white alabastrum(tetraploid) 3
23.097
CNS0095610
Silvery flower (diploied) 1
16.775
CNS0095611
Silvery flower (diploied) 2
11.752
CNS0095612
Silvery flower (diploied) 3
12.223
CNS0095613
Golden flower (tetraploid) 1
11.707
CNS0095614
Golden flower (tetraploid) 2
9.573
CNS0095615
Golden flower (tetraploid) 3
9.015
CRA001975
CRR073297
Stem 1
11.257
CRR073298
Stem 2
10.740
CRR073299
Stem 3
11.161
CRR073300
Leaf 1
9.276
CRR073301
Leaf 2
9.831
CRR073302
Leaf 3
7.254
CRR073303
Juvenile bud 1
7.937
CRR073304
Juvenile bud 2
6.479
CRR073305
Juvenile bud 3
6.264
CRR073306
Third green 1
2.147
CRR073307
Third green 2
2.780
CRR073308
Third green 3
3.497
CRR073309
Second white 1
3.402
CRR073310
Second white 2
4.789
CRR073311
Second white 3
2.514
CRR073312
Silver flowering 1
2.575
CRR073313
Silver flowering 2
1.768
CRR073314
Silver flowering 3
2.555
CRR073315
Gold flowering 1
5.580
CRR073316
Gold flowering 2
10.707
CRR073317
Gold flowering 3
8.024
CRR073318
Tawny withering 1
9.831
CRR073319
Tawny withering 2
8.442
CRR073320
Tawny withering 3
11.552