Detail information of GWHGAAZE000736


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006424859.18.21362E-65hypothetical protein CICLE_v10029345mg [Citrus clementina]
trEMBLtr|V4UFJ9|V4UFJ9_9ROSI3E-65Uncharacterized protein {ECO:0000313|EMBL:ESR38099.1}
TAIR10AT5G59460.12E-28scarecrow-like transcription factor 11 (SCL11)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene1489035414893587+
GWHAAZE00000001mRNA1489035414893587+
GWHAAZE00000001exon1489035414890395+
GWHAAZE00000001exon1489134214891439+
GWHAAZE00000001exon1489177014891851+
GWHAAZE00000001exon1489195414892039+
GWHAAZE00000001exon1489333514893587+
GWHAAZE00000001CDS1489035414890395+
GWHAAZE00000001CDS1489134214891439+
GWHAAZE00000001CDS1489177014891851+
GWHAAZE00000001CDS1489195414892039+
GWHAAZE00000001CDS1489333514893587+
Transcript Sequence

Network for GWHGAAZE000736

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12593MPHOSPH6, MPP6 RNA degradation map03018

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf17.743
SRR3591706second leaf15.836
SRR3591707mature leaf13.854
SRR3591708Shoot apex31.329
SRR3591709Stem22.349
SRR3591710White floral bud12.909
SRR3591711White flower21.509
SRR3591712Green floral bud20.153
SRR3591713Yellow flower14.130
SRP173429 SRR8316895Juvenile bud stage 17.386
SRR8316896Juvenile bud stage 20.524
SRR8316897Juvenile bud stage 12.620
SRR8316894Third green stage 11.752
SRR8316900Third green stage 24.253
SRR8316901Third green stage 22.292
SRR8316898Complete white stage 9.157
SRR8316899Complete white stage 29.645
SRR8316903Complete white stage 10.421
SRR8316902Silver flowering stage8.692
SRR8316904Silver flowering stage9.419
SRR8316905Silver flowering stage5.028
SRR8316906Gold flowering stage 16.685
SRR8316907Gold flowering stage 14.431
SRR8316908Gold flowering stage 14.902
SRP132670SRR6706286Control3.767
SRR6706287Light intensity 50%5.506
SRR6706288Light intensity 20%6.323
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.671
CNS0095593Slightly white alabastrum(diploid) 223.973
CNS0095594Slightly white alabastrum(diploid) 329.424
CNS0095595Whole white alabastrum(diploid) 219.436
CNS0095596Whole white alabastrum(diploid) 316.529
CNS0095597Whole white alabastrum(diploid) 416.511
CNS0095598Silvery flower (diploied) 121.510
CNS0095599Silvery flower (diploied) 217.855
CNS0095600Silvery flower (diploied) 313.387
CNS0095601Golden flower (diploid) 113.946
CNS0095602Golden flower (diploid) 212.807
CNS0095603Golden flower (diploid) 314.932
CNS0095604Slightly white alabastrum(tetraploid) 121.253
CNS0095605Slightly white alabastrum(tetraploid) 221.011
CNS0095606Slightly white alabastrum(tetraploid) 334.609
CNS0095607Whole white alabastrum(tetraploid) 115.841
CNS0095608Whole white alabastrum(tetraploid) 210.423
CNS0095609Whole white alabastrum(tetraploid) 323.097
CNS0095610Silvery flower (diploied) 116.775
CNS0095611Silvery flower (diploied) 211.752
CNS0095612Silvery flower (diploied) 312.223
CNS0095613Golden flower (tetraploid) 111.707
CNS0095614Golden flower (tetraploid) 29.573
CNS0095615Golden flower (tetraploid) 39.015
CRA001975CRR073297Stem 111.257
CRR073298Stem 210.740
CRR073299Stem 311.161
CRR073300Leaf 19.276
CRR073301Leaf 29.831
CRR073302Leaf 37.254
CRR073303Juvenile bud 17.937
CRR073304Juvenile bud 26.479
CRR073305Juvenile bud 36.264
CRR073306Third green 12.147
CRR073307Third green 22.780
CRR073308Third green 33.497
CRR073309Second white 13.402
CRR073310Second white 24.789
CRR073311Second white 32.514
CRR073312Silver flowering 12.575
CRR073313Silver flowering 21.768
CRR073314Silver flowering 32.555
CRR073315Gold flowering 15.580
CRR073316Gold flowering 210.707
CRR073317Gold flowering 38.024
CRR073318Tawny withering 19.831
CRR073319Tawny withering 28.442
CRR073320Tawny withering 311.552