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Detail information of GWHGAAZE000850
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_010035741.1
2.90781E-18
PREDICTED: uncharacterized protein LOC104424909 [Eucalyptus grandis]
trEMBL
tr|A0A059D0N6|A0A059D0N6_EUCGR
1E-18
Uncharacterized protein {ECO:0000313|EMBL:KCW84298.1}
TAIR10
AT5G60030.1
0.000004
Without detailed annotation
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000001
gene
17938014
17938874
-
GWHAAZE00000001
mRNA
17938014
17938874
-
GWHAAZE00000001
exon
17938014
17938874
-
GWHAAZE00000001
CDS
17938014
17938874
-
Transcript Sequence
>GWHTAAZE000852 ATGAAGTCAGTTTCGGGAAAAGTTTCATCTTCAAAGCCAATATCTCTCTCCAAAGCTGCTAAAATCCTCTCCAATTTCGTCTCTGTCGACAATGGAGCTTCCCAAGCCCTACAAGTTTATCTCAAACGAGCTTCATCTTCCTTCGCCGAATTGGTTCAGGTACACAAAGGTCCCAAATCATCACAATCTAATCGAAAAACAGAAGAAATACCTACGAAGATCGATATACACAATCAAACCCTTGAAAATGCTGTACATATCAAATCATCTCACTCTGATCGACGAAGCGAAAATCAGCATCAGAAGATTGATATTCATAATGAAACCTTAGAAAAAGCTCATTCGAGTCGGAAGCATAAGAAGCATCGGAGCGAGAGTGTGAATGATGAGAATACAGTGAAGGATCAGCGAAAAATTGAAGACTTTGATGAAAGGGGGGTGAAGGATGGGGAAAAAGTTAGAGAATTTGATGATAGGAATAAGCATCGGAGTGAGAACGTTAACAATGAGAATGAGAATAGAGGGAAGGATCAGCAAAAGAATGAAGAATTTGATGGGAGGAGGGATAATGTGGAGGATGGTGTGAAAAGGAGAGATAAGAAAGCGAAGAAGCATAAAGGCGTAGAAAGGGAAGAAATGAGGATGGATGGTGTGAACAGAGAGAAAGAACAAGAGAAAATTGAAGAATTGGAGGAGAGGAGGGACAATGTGGAAGATAGTGTAAGAAAGAGAGATAAGAAAGCGAAGAAGCAGAAAGCTGTAGAGAGAGAAGATGAAGGAGTTTTGGGGGAGGAGGAGGAGGGAAAGAGAAGAAGAAGAATAAGAAGAAAAGGAAGAATCGCGAGGATGATGGTGAGTTAG
Network for GWHGAAZE000850
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
--
--
--
--
--
Protein Sequence
>GWHPAAZE000851 MKSVSGKVSSSKPISLSKAAKILSNFVSVDNGASQALQVYLKRASSSFAELVQVHKGPKSSQSNRKTEEIPTKIDIHNQTLENAVHIKSSHSDRRSENQHQKIDIHNETLEKAHSSRKHKKHRSESVNDENTVKDQRKIEDFDERGVKDGEKVREFDDRNKHRSENVNNENENRGKDQQKNEEFDGRRDNVEDGVKRRDKKAKKHKGVEREEMRMDGVNREKEQEKIEELEERRDNVEDSVRKRDKKAKKQKAVEREDEGVLGEEEEGKRRRRIRRKGRIARMMVS
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
--
--
--
--
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
8.642
SRR3591706
second leaf
7.422
SRR3591707
mature leaf
7.485
SRR3591708
Shoot apex
13.081
SRR3591709
Stem
8.604
SRR3591710
White floral bud
8.999
SRR3591711
White flower
11.652
SRR3591712
Green floral bud
13.687
SRR3591713
Yellow flower
8.069
SRP173429
SRR8316895
Juvenile bud stage
7.617
SRR8316896
Juvenile bud stage
7.963
SRR8316897
Juvenile bud stage
5.282
SRR8316894
Third green stage
6.478
SRR8316900
Third green stage
15.886
SRR8316901
Third green stage
14.989
SRR8316898
Complete white stage
3.600
SRR8316899
Complete white stage
10.841
SRR8316903
Complete white stage
8.778
SRR8316902
Silver flowering stage
6.253
SRR8316904
Silver flowering stage
10.384
SRR8316905
Silver flowering stage
5.679
SRR8316906
Gold flowering stage
14.223
SRR8316907
Gold flowering stage
13.736
SRR8316908
Gold flowering stage
13.677
SRP132670
SRR6706286
Control
8.102
SRR6706287
Light intensity 50%
9.267
SRR6706288
Light intensity 20%
10.485
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
14.548
CNS0095593
Slightly white alabastrum(diploid) 2
14.955
CNS0095594
Slightly white alabastrum(diploid) 3
18.234
CNS0095595
Whole white alabastrum(diploid) 2
13.770
CNS0095596
Whole white alabastrum(diploid) 3
9.168
CNS0095597
Whole white alabastrum(diploid) 4
11.914
CNS0095598
Silvery flower (diploied) 1
11.747
CNS0095599
Silvery flower (diploied) 2
11.428
CNS0095600
Silvery flower (diploied) 3
8.496
CNS0095601
Golden flower (diploid) 1
10.544
CNS0095602
Golden flower (diploid) 2
7.482
CNS0095603
Golden flower (diploid) 3
6.605
CNS0095604
Slightly white alabastrum(tetraploid) 1
13.274
CNS0095605
Slightly white alabastrum(tetraploid) 2
10.691
CNS0095606
Slightly white alabastrum(tetraploid) 3
14.660
CNS0095607
Whole white alabastrum(tetraploid) 1
8.158
CNS0095608
Whole white alabastrum(tetraploid) 2
9.923
CNS0095609
Whole white alabastrum(tetraploid) 3
11.108
CNS0095610
Silvery flower (diploied) 1
12.383
CNS0095611
Silvery flower (diploied) 2
8.397
CNS0095612
Silvery flower (diploied) 3
6.422
CNS0095613
Golden flower (tetraploid) 1
11.422
CNS0095614
Golden flower (tetraploid) 2
9.878
CNS0095615
Golden flower (tetraploid) 3
6.535
CRA001975
CRR073297
Stem 1
6.083
CRR073298
Stem 2
7.220
CRR073299
Stem 3
3.942
CRR073300
Leaf 1
7.042
CRR073301
Leaf 2
7.493
CRR073302
Leaf 3
2.468
CRR073303
Juvenile bud 1
2.773
CRR073304
Juvenile bud 2
4.021
CRR073305
Juvenile bud 3
1.851
CRR073306
Third green 1
2.812
CRR073307
Third green 2
1.659
CRR073308
Third green 3
1.235
CRR073309
Second white 1
0.624
CRR073310
Second white 2
1.745
CRR073311
Second white 3
2.062
CRR073312
Silver flowering 1
0.475
CRR073313
Silver flowering 2
0.693
CRR073314
Silver flowering 3
0.319
CRR073315
Gold flowering 1
4.508
CRR073316
Gold flowering 2
5.833
CRR073317
Gold flowering 3
0.049
CRR073318
Tawny withering 1
5.497
CRR073319
Tawny withering 2
4.193
CRR073320
Tawny withering 3
4.638