Gene detail

Detail information of GWHGAAZE001874

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CBI39884.3	4.09234E-58	unnamed protein product [Vitis vinifera]
Swissprot	tr\|H2DH21\|C7A29_PANGI	2E-58	Cytochrome P450 CYP72A219
trEMBL	tr\|F6I4Y1\|F6I4Y1_VITVI	4E-58	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB62076.1}
TAIR10	AT3G14690.1	4E-38	cytochrome P450, family 72, subfamily A, polypeptide 15

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	63550415	63553380	-
GWHAAZE00000001	mRNA	63550415	63553380	-
GWHAAZE00000001	exon	63553113	63553380	-
GWHAAZE00000001	exon	63550415	63550677	-
GWHAAZE00000001	CDS	63553113	63553380	-
GWHAAZE00000001	CDS	63550415	63550677	-

Transcript Sequence
>GWHTAAZE001878 ATGCTGTACAACTCAGTTGCAGCTTGCTGTGCTATAGCAATTATACTCTGCGCATGGAGGATGTTTGATTTGGTGTGGGTGAGGCCCATGAAGAGAGACAAGTACCTCAGAAATCAAGGTTTCAAGGGAAGCTCTTACAGCCTTCTCTTTGGAGATACCAAAAGGATCAACATGATGATTAAGGAAGCCAAGTCTAACCCCATCAATCTCTCCCATGATATTGTGCCACGTGTTCTCCCCTGGATGCATGATTCTATCCAGAAATATGGTAAGAATTTTTTCATATGGTTTGGGTCAGTACCAAGGGTGCACATAATGGAGCCAGAATTAATAAGGGAGATACTGAATAAGCATCAGATCTTCCAGAAGCCTAAGACAAATCCATTAATGAAGTTGTTTGTAGATGGACTGGGAAGCCATGAGGAGGAAAAATGGGCCAAACACAGGAAAATTATCAACCCTGCTTTCCATGTTGAGAAGTTAAAGGTTTTTTTTTTTAACCTGTTTCCTCTTTATTATTTTGATTTTTAA

Network for GWHGAAZE001874

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	85	161	1.20E-08
PF01238.22	PMI_typeI	9	379	3.00E-102

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K01809	manA, MPI	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Fructose and mannose metabolism	map00051
		Amino sugar and nucleotide sugar metabolism	map00520

Gene Ontology

GO term	Ontology	Name
GO:0005975	biological_process	carbohydrate metabolic process
GO:0009298	biological_process	GDP-mannose biosynthetic process
GO:0055114	biological_process	oxidation-reduction process
GO:0004476	molecular_function	mannose-6-phosphate isomerase activity
GO:0008270	molecular_function	zinc ion binding
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	12.486
	SRR3591706	second leaf	13.438
	SRR3591707	mature leaf	21.933
	SRR3591708	Shoot apex	5.147
	SRR3591709	Stem	19.960
	SRR3591710	White floral bud	30.750
	SRR3591711	White flower	71.001
	SRR3591712	Green floral bud	20.416
	SRR3591713	Yellow flower	134.838
SRP173429	SRR8316895	Juvenile bud stage	0.326
	SRR8316896	Juvenile bud stage	1.205
	SRR8316897	Juvenile bud stage	2.704
	SRR8316894	Third green stage	1.008
	SRR8316900	Third green stage	1.413
	SRR8316901	Third green stage	1.135
	SRR8316898	Complete white stage	0.288
	SRR8316899	Complete white stage	1.574
	SRR8316903	Complete white stage	0.290
	SRR8316902	Silver flowering stage	0.189
	SRR8316904	Silver flowering stage	0.621
	SRR8316905	Silver flowering stage	0.118
	SRR8316906	Gold flowering stage	1.335
	SRR8316907	Gold flowering stage	0.073
	SRR8316908	Gold flowering stage	8.141
SRP132670	SRR6706286	Control	0.686
	SRR6706287	Light intensity 50%	0.995
	SRR6706288	Light intensity 20%	0.858
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.306
	CNS0095593	Slightly white alabastrum(diploid) 2	0.102
	CNS0095594	Slightly white alabastrum(diploid) 3	1.006
	CNS0095595	Whole white alabastrum(diploid) 2	0.954
	CNS0095596	Whole white alabastrum(diploid) 3	0.235
	CNS0095597	Whole white alabastrum(diploid) 4	0.404
	CNS0095598	Silvery flower (diploied) 1	0.697
	CNS0095599	Silvery flower (diploied) 2	0.223
	CNS0095600	Silvery flower (diploied) 3	1.593
	CNS0095601	Golden flower (diploid) 1	0.604
	CNS0095602	Golden flower (diploid) 2	1.610
	CNS0095603	Golden flower (diploid) 3	1.904
	CNS0095604	Slightly white alabastrum(tetraploid) 1	2.072
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.505
	CNS0095606	Slightly white alabastrum(tetraploid) 3	4.070
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.210
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.172
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.259
	CNS0095610	Silvery flower (diploied) 1	0.933
	CNS0095611	Silvery flower (diploied) 2	3.231
	CNS0095612	Silvery flower (diploied) 3	0.239
	CNS0095613	Golden flower (tetraploid) 1	0.736
	CNS0095614	Golden flower (tetraploid) 2	3.341
	CNS0095615	Golden flower (tetraploid) 3	0.906
CRA001975	CRR073297	Stem 1	0.879
	CRR073298	Stem 2	0.179
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	1.193
	CRR073301	Leaf 2	0.339
	CRR073302	Leaf 3	0.448
	CRR073303	Juvenile bud 1	0.039
	CRR073304	Juvenile bud 2	0.428
	CRR073305	Juvenile bud 3	0.173
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.761
	CRR073308	Third green 3	0.645
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.086
	CRR073316	Gold flowering 2	0.328
	CRR073317	Gold flowering 3	0.057
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	1.744
	CRR073320	Tawny withering 3	1.260