Detail information of GWHGAAZE002049


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007149730.11.30062E-87hypothetical protein PHAVU_005G094400g [Phaseolus vulgaris]
COGYP_007249079.10.000002TIGR00270 family protein
Swissprottr|Q9LXT3|MBF1B_ARATH4E-86Multiprotein-bridging factor 1b
trEMBLtr|V7BUV4|V7BUV4_PHAVU5E-88Uncharacterized protein {ECO:0000313|EMBL:ESW21724.1}
TAIR10AT3G58680.11E-60multiprotein bridging factor 1B

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene6791859367925406-
GWHAAZE00000001mRNA6791859367925406-
GWHAAZE00000001exon6791859367918933-
GWHAAZE00000001exon6791942067919502-
GWHAAZE00000001exon6792434067924423-
GWHAAZE00000001exon6792526567925406-
GWHAAZE00000001CDS6792526567925406-
GWHAAZE00000001CDS6792434067924423-
GWHAAZE00000001CDS6791942067919502-
GWHAAZE00000001CDS6791881467918933-
GWHAAZE00000001three_prime_UTR6791859367918813-
Transcript Sequence

Network for GWHGAAZE002049

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08523.11MBF19796.50E-23
PF01381.23HTH_3871376.10E-12
PF13968.7DUF4220323453.60E-65
PF04578.14DUF5945686183.30E-19
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMBF1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf123.064
SRR3591706second leaf65.103
SRR3591707mature leaf44.467
SRR3591708Shoot apex129.380
SRR3591709Stem104.975
SRR3591710White floral bud88.551
SRR3591711White flower113.866
SRR3591712Green floral bud85.142
SRR3591713Yellow flower98.684
SRP173429 SRR8316895Juvenile bud stage 95.973
SRR8316896Juvenile bud stage 125.344
SRR8316897Juvenile bud stage 69.225
SRR8316894Third green stage 51.955
SRR8316900Third green stage 162.371
SRR8316901Third green stage 164.100
SRR8316898Complete white stage 94.527
SRR8316899Complete white stage 249.195
SRR8316903Complete white stage 142.771
SRR8316902Silver flowering stage109.617
SRR8316904Silver flowering stage113.444
SRR8316905Silver flowering stage61.816
SRR8316906Gold flowering stage 224.582
SRR8316907Gold flowering stage 246.628
SRR8316908Gold flowering stage 268.141
SRP132670SRR6706286Control146.149
SRR6706287Light intensity 50%133.810
SRR6706288Light intensity 20%136.625
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1199.221
CNS0095593Slightly white alabastrum(diploid) 2218.351
CNS0095594Slightly white alabastrum(diploid) 3206.908
CNS0095595Whole white alabastrum(diploid) 2178.821
CNS0095596Whole white alabastrum(diploid) 3164.561
CNS0095597Whole white alabastrum(diploid) 4160.634
CNS0095598Silvery flower (diploied) 1259.386
CNS0095599Silvery flower (diploied) 2232.215
CNS0095600Silvery flower (diploied) 3239.825
CNS0095601Golden flower (diploid) 1252.080
CNS0095602Golden flower (diploid) 2226.768
CNS0095603Golden flower (diploid) 3222.111
CNS0095604Slightly white alabastrum(tetraploid) 1187.363
CNS0095605Slightly white alabastrum(tetraploid) 2190.083
CNS0095606Slightly white alabastrum(tetraploid) 3233.356
CNS0095607Whole white alabastrum(tetraploid) 1162.965
CNS0095608Whole white alabastrum(tetraploid) 2140.979
CNS0095609Whole white alabastrum(tetraploid) 3186.637
CNS0095610Silvery flower (diploied) 1307.758
CNS0095611Silvery flower (diploied) 2293.147
CNS0095612Silvery flower (diploied) 3263.531
CNS0095613Golden flower (tetraploid) 1336.859
CNS0095614Golden flower (tetraploid) 2300.787
CNS0095615Golden flower (tetraploid) 3283.702
CRA001975CRR073297Stem 1151.176
CRR073298Stem 2165.894
CRR073299Stem 3205.507
CRR073300Leaf 1174.639
CRR073301Leaf 2184.695
CRR073302Leaf 3194.208
CRR073303Juvenile bud 1217.523
CRR073304Juvenile bud 2173.162
CRR073305Juvenile bud 3187.040
CRR073306Third green 1151.375
CRR073307Third green 2168.902
CRR073308Third green 3164.236
CRR073309Second white 1257.191
CRR073310Second white 2231.822
CRR073311Second white 3177.020
CRR073312Silver flowering 1206.137
CRR073313Silver flowering 2222.808
CRR073314Silver flowering 3181.104
CRR073315Gold flowering 1225.636
CRR073316Gold flowering 2224.638
CRR073317Gold flowering 3146.642
CRR073318Tawny withering 1264.975
CRR073319Tawny withering 2281.646
CRR073320Tawny withering 3249.316