Detail information of GWHGAAZE002122


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrABR17565.14.64948E-15unknown [Picea sitchensis]
COGYP_001531045.10.00000002alpha/beta hydrolase fold protein
Swissprottr|O80475|MES8_ARATH4E-17Methylesterase 8
trEMBLtr|B8LPI5|B8LPI5_PICSI2E-15Putative uncharacterized protein {ECO:0000313|EMBL:ABR17565.1}
TAIR10AT2G23590.14E-14methyl esterase 8

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene6998461769984835+
GWHAAZE00000001mRNA6998461769984835+
GWHAAZE00000001exon6998461769984835+
GWHAAZE00000001CDS6998461769984835+
Transcript Sequence

Network for GWHGAAZE002122

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13639.7zf-RING_21041471.30E-12
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING
Ubiquitin FamilyU-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.277
SRR3591706second leaf0.246
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.000
SRR3591709Stem0.000
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.354
SRR3591713Yellow flower0.234
SRP173429 SRR8316895Juvenile bud stage 0.464
SRR8316896Juvenile bud stage 5.234
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.249
SRR8316901Third green stage 0.205
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.739
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.205
SRR8316904Silver flowering stage0.047
SRR8316905Silver flowering stage0.112
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.752
SRR6706287Light intensity 50%0.752
SRR6706288Light intensity 20%0.959
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.194
CNS0095594Slightly white alabastrum(diploid) 30.000
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.189
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.196
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.061
CNS0095603Golden flower (diploid) 30.207
CNS0095604Slightly white alabastrum(tetraploid) 10.036
CNS0095605Slightly white alabastrum(tetraploid) 20.000
CNS0095606Slightly white alabastrum(tetraploid) 30.668
CNS0095607Whole white alabastrum(tetraploid) 10.214
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.738
CNS0095610Silvery flower (diploied) 10.188
CNS0095611Silvery flower (diploied) 20.000
CNS0095612Silvery flower (diploied) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.456
CRR073298Stem 20.649
CRR073299Stem 30.699
CRR073300Leaf 10.000
CRR073301Leaf 20.359
CRR073302Leaf 30.611
CRR073303Juvenile bud 10.262
CRR073304Juvenile bud 20.770
CRR073305Juvenile bud 30.268
CRR073306Third green 10.617
CRR073307Third green 20.559
CRR073308Third green 30.522
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.239
CRR073317Gold flowering 30.068
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000